亚硝态氮胁迫下菲律宾蛤仔实时定量PCR内参基因的筛选
文献类型:期刊论文
作者 | 王爱云; 曹滕飞; 吕家森; 丛明![]() |
刊名 | 生态毒理学报
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出版日期 | 2019 |
卷号 | 14期号:1页码:153-160 |
关键词 | 亚硝态氮 菲律宾蛤仔 内参基因 转录组学 实时荧光定量pcr Nitrite Ruditapes Philippinarum Reference Gene Transcriptome Quantitative Real-time Pcr |
ISSN号 | 1673-5897 |
其他题名 | Selection of Reference Genes by Quantitative Real-Time PCR for Ruditapes philippinarum Exposed to Nitrite |
产权排序 | (1) 鲁东大学生命科学学院 ; (2) 烟台大学生命学院 ; (3) 中国科学院烟台海岸带研究所 |
英文摘要 | In order to well investigate the eco-toxicity of nitrite on molluscs, a suitable housekeeper gene was needed for further analysis to qualify the toxicity-related genes. In the present study, the clam Ruditapes philippinarum was used as the target mollusc and cDNAs templates were got from gill tissue RNA of R. philippinarum after nitrite exposure. Six candidate genes were assayed in terms of their expression stabilities by geNorm and NormFinder softwares, followed by a comprehensive weighting comparison. GeNorm analysis indicated that the stability order for the six genes were Actin>CyPA>EF1alpha>Ubi>18S>Tubu. However, a little different order was suggested by the Normfinder software, Actin>Ubi>CyPA>EF1alpha>18S>Tubu. After a comprehensive weighting comparison, the final stability order of the six genes was Actin>CyPA>Ubi>EF1alpha>18S>Tubu. So, the Actin gene was the most suitable reference gene to qualify target genes for their expression levels in the clam R. philippinarum after nitrite exposure. |
WOS关键词 | 亚硝态氮 ; 菲律宾蛤仔 ; 内参基因 ; 转录组学 ; 实时荧光定量pcr ; Nitrite ; Ruditapes Philippinarum ; Reference Gene ; Transcriptome ; Quantitative Real-time Pcr |
WOS研究方向 | Environmental Sciences & Ecology |
语种 | 中文 |
CSCD记录号 | CSCD:6506667 |
源URL | [http://ir.yic.ac.cn/handle/133337/25154] ![]() |
专题 | 烟台海岸带研究所_近岸生态与环境实验室 烟台海岸带研究所_污染过程与控制实验室 |
作者单位 | 1.中国科学院烟台海岸带研究所 2.烟台大学生命学院; 3.鲁东大学生命科学学院; |
推荐引用方式 GB/T 7714 | 王爱云,曹滕飞,吕家森,等. 亚硝态氮胁迫下菲律宾蛤仔实时定量PCR内参基因的筛选[J]. 生态毒理学报,2019,14(1):153-160. |
APA | 王爱云,曹滕飞,吕家森,&丛明.(2019).亚硝态氮胁迫下菲律宾蛤仔实时定量PCR内参基因的筛选.生态毒理学报,14(1),153-160. |
MLA | 王爱云,et al."亚硝态氮胁迫下菲律宾蛤仔实时定量PCR内参基因的筛选".生态毒理学报 14.1(2019):153-160. |
入库方式: OAI收割
来源:烟台海岸带研究所
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