The microplastics removal and its effects on membrane fouling in membrane bioreactor (MBR) for treating polluted surface water in drinking purpose was investigated in this study. Typical microplastics polyvinylchloride (PVC) with concentration 10 particles/L was added in the feed water. MBR was effective in treating organic matters and ammonia with removal rate over 80% and 95%, respectively. The removal performance was immediately inhibited with the microplastics PVC added into the MBR system, and recovered after operated for few days. The membrane fouling and cleaning results indicated that microplastics contamination could led to higher membrane fouling, and also the irreversible membrane fouling. The main contributor of rejection is the membrane module and the adsorption onto bio-carrier. The microbial community of the system before and after PVC addition did not show obvious difference. MBR has the potential to be used as effective technology in treating microplastics contaminated polluted surface water.