A protein structural alphabet and its substitution matrix CLESUM
文献类型：会议论文
| 作者 | Zheng, WM ; Liu, X
|
| 出版日期 | 2005 |
| 会议日期 | MAY 22-24, 2005 |
| 会议地点 | Emory Univ, Atlanta, GA |
| 关键词 | HIDDEN MARKOV MODEL PREDICTION BACKBONE |
| 卷号 | 3680 |
| DOI | 10.1109/WOCC.2005.1553741 |
| 页码 | 59-67 |
| 英文摘要 | By using a mixture model for the density distribution of the three psendobond angles formed by C-alpha atoms of four consecutive residues, the local structural states are discretized as 17 conformational letters of a protein structural alphabet. This coarse-graining procedure converts a 3D structure to a 1D code sequence. A substitution matrix between these letters is constructed based on the structural alignments of the PSSP database. |
| 源文献作者 | Emory Univ |
| 会议录 | TRANSACTIONS ON COMPUTATIONAL SYSTEMS BIOLOGY II
 |
| 会议录出版者 | SPRINGER-VERLAG BERLIN |
| 会议录出版地 | BERLIN |
| 语种 | 英语 |
| URL标识 | 查看原文 |
| ISSN号 | 0302-9743 |
| WOS研究方向 | Biochemistry & Molecular Biology ; Computer Science |
| ISBN号 | 3-540-29401-5 |
| 源URL | [http://ir.itp.ac.cn/handle/311006/23709]  |
| 专题 | SCI会议论文 |
| 作者单位 | 1.Acad Sinica, Inst Theoret Phys, Beijing 100080, Peoples R China 2.Acad Sinica, Interdisciplinary Ctr Theoret Studies, Beijing 100080, Peoples R China |
| 推荐引用方式 GB/T 7714 | Zheng, WM,Liu, X. A protein structural alphabet and its substitution matrix CLESUM[C]. 见:. Emory Univ, Atlanta, GA. MAY 22-24, 2005. |
入库方式： OAI收割
来源：理论物理研究所
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