Characterization of the complete chloroplast genome of traditional Tibetan herb, Rheum Pumilum Maxim. (Polygonaceae)
文献类型：期刊论文
| 作者 | Li, Rui; Zhang, Xiaofeng ; Wang, Jiuli; Zhou, Dangwei; Wang, Huan; Shi, Shengbo; Cheng, Tingfeng
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| 刊名 | MITOCHONDRIAL DNA PART B-RESOURCES
 |
| 出版日期 | 2020 |
| 卷号 | 5期号:1 |
| 关键词 | Rheum pumilum Maxim. chloroplast genome phylogenetic analysis |
| 英文摘要 | The complete chloroplast genome sequence of traditional Tibetan herb, Rheum pumilum Maxim. was analyzed. The complete chloroplast genome of R. pumilum is 162,213 bp in size and has a 27.27% GC content. In the typical circular quadripartite structure, there was a pair of inverted repeat (IR) regions with 31,023 bp in length, which separated by a large single-copy (LSC) region (87,424 bp) and a small single-copy (SSC) region (12,743 bp). The chloroplast genome of R. pumilum contained 131 unigenes, which was composed of 86 protein-coding genes, 37 tRNA and 8 rRNA genes. Moreover, 238 SSRs were identified and 58.8% of them existed in LSC region. A maximum likelihood (ML) phylogenetic analysis based on chloroplast genomes indicated that R. pumilum was closely related to R. pulmatum, R. tangutica, and R. officinale. Our results would provide a valuable resource for resource utilization and the phylogenetic studies of Rheum in Polygonaceae. |
| 源URL | [http://210.75.249.4/handle/363003/60461]  |
| 专题 | 西北高原生物研究所_中国科学院西北高原生物研究所 |
| 推荐引用方式 GB/T 7714 | Li, Rui,Zhang, Xiaofeng,Wang, Jiuli,et al. Characterization of the complete chloroplast genome of traditional Tibetan herb, Rheum Pumilum Maxim. (Polygonaceae)[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2020,5(1). |
| APA | Li, Rui.,Zhang, Xiaofeng.,Wang, Jiuli.,Zhou, Dangwei.,Wang, Huan.,...&Cheng, Tingfeng.(2020).Characterization of the complete chloroplast genome of traditional Tibetan herb, Rheum Pumilum Maxim. (Polygonaceae).MITOCHONDRIAL DNA PART B-RESOURCES,5(1). |
| MLA | Li, Rui,et al."Characterization of the complete chloroplast genome of traditional Tibetan herb, Rheum Pumilum Maxim. (Polygonaceae)".MITOCHONDRIAL DNA PART B-RESOURCES 5.1(2020). |
入库方式： OAI收割
来源：西北高原生物研究所
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