Metagenomic analysis of microbial community and function involved in cd-contaminated soil
文献类型：期刊论文
| 作者 | Feng, Gang2; Xie, Tian2; Wang, Xin2; Bai, Jiuyuan2; Tang, Lin3; Zhao, Hai1; Wei, Wei2; Wang, Maolin2; Zhao, Yun2 |
| 刊名 | BMC MICROBIOLOGY
 |
| 出版日期 | 2019-02-13 |
| 卷号 | 18页码:11 |
| 关键词 | Metagenomic Microbial community Cadmium-contaminated Functional potentials |
| ISSN号 | 1471-2180 |
| DOI | 10.1186/s12866-018-1152-5 |
| 产权排序 | 3 |
| 文献子类 | Article |
| 英文摘要 | Background: Soil contaminated with the heavy metal Cadmium (Cd) is a widespread problem in many parts of the world. Based on metagenomic analysis, we investigated the functional potential and structural diversity of the microbial community in Cd-contaminated and non-contaminated soil samples and we explored the associated metabolic pathway network in cluster of orthologous groups (COG) and Kyoto Encyclopedia of Genes and Genomes (KEGG). Results: The results showed that microorganisms in these soils were quite abundant, and many of them possessed numerous physiological functions. However, Cd-contamination has the potential to reduce the microbial diversity and further alter the community structure in the soil. Notably, function analysis of the crucial microorganisms (e.g. Proteobacteria, Sulfuricella and Thiobacillus) indicated that these bacteria and their corresponding physiological functions were important for the community to cope with Cd pollution. The COG annotation demonstrated that the predominant category was the microbial metabolism cluster in both soil samples, while the relative abundance of metabolic genes was increased in the Cd-contaminated soil. The KEGG annotation results exhibited that the non-contaminated soil had more genes, pathways, modules, orthologies and enzymes involved in metabolic pathways of microbial communities than the Cd-contaminated soil. The relative abundance of some dominant KEGG pathways increased in the Cd contaminated soil, and they were mostly enriched to the metabolism, biosynthesis and degradation of amino acids, fatty acids and nucleotides, which was related to Cd tolerance of the microorganisms. Conclusions: Cd-contamination can decrease the taxonomic species of microbes in soil and change the soil microbial composition. The functional pathways involved in the soil change with microbial structure variation, many of which are related to the heavy metal tolerance of soil microbes. The Cd-contaminated soil microbes is a potential resource for exploring cadmium resistant or tolerant bacteria. |
| URL标识 | 查看原文 |
| WOS关键词 | BIOLOGICAL PHOSPHORUS REMOVAL ; HEAVY-METAL RESISTANCE ; FATTY-ACID-COMPOSITION ; ENZYME-ACTIVITIES ; HEALTH-RISK ; DIVERSITY ; CADMIUM ; BACTERIA ; BIOMASS ; PLANTS |
| WOS研究方向 | Microbiology |
| 语种 | 英语 |
| WOS记录号 | WOS:000425125500001 |
| 出版者 | BIOMED CENTRAL LTD |
| 源URL | [http://210.75.237.14/handle/351003/30332]  |
| 专题 | 环境治理与食品安全领域_应用与环境微生物研究 |
| 作者单位 | 1.Chinese Acad Sci, Chengdu Inst Biol, Chengdu 610041, Sichuan, Peoples R China 2.Sichuan Univ, Key Lab Bioresource & Ecoenvironm, Minist Educ, Coll Life Sci, 24 South Sect 1,Yihuan Rd, Chengdu 610065, Sichuan, Peoples R China; 3.Tibet Acad Agr & Anim Husb Sci, Lhasa 850002, Peoples R China; |
| 推荐引用方式 GB/T 7714 | Feng, Gang,Xie, Tian,Wang, Xin,et al. Metagenomic analysis of microbial community and function involved in cd-contaminated soil[J]. BMC MICROBIOLOGY,2019,18:11. |
| APA | Feng, Gang.,Xie, Tian.,Wang, Xin.,Bai, Jiuyuan.,Tang, Lin.,...&Zhao, Yun.(2019).Metagenomic analysis of microbial community and function involved in cd-contaminated soil.BMC MICROBIOLOGY,18,11. |
| MLA | Feng, Gang,et al."Metagenomic analysis of microbial community and function involved in cd-contaminated soil".BMC MICROBIOLOGY 18(2019):11. |
入库方式： OAI收割
来源：成都生物研究所
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