Transcriptome analysis reveals novel insights into the continuous cropping induced response in Codonopsis tangshen, a medicinal herb
文献类型：期刊论文
| 作者 | He, Yinsheng1,2; Zhang, Meide1; Zhou, Wuxian1; Ai, Lunqiang1; You, Jinwen1; Liu, Haihua1; You, Jingmao1; Wang, Hua1; Wassie, Misganaw3; Wang, Mo2 |
| 刊名 | PLANT PHYSIOLOGY AND BIOCHEMISTRY
 |
| 出版日期 | 2019-08-01 |
| 卷号 | 141页码:279-290 |
| 关键词 | Codonopsis tangshen Continuous cropping RNA-Seq Photosynthesis Transcriptome |
| ISSN号 | 0981-9428 |
| DOI | 10.1016/j.plaphy.2019.06.001 |
| 英文摘要 | Codonopsis tangshen Oliv. (C. tangshen Oliv.), a famous medicinal herb in China, is seriously affected by continuous cropping (C-cro). The physiological and biochemical results indicated that C-cro significantly affected the malonaldehyde (MDA) and chlorophyll content, as well as activities of catalase (CAT) and superoxide dis-mutase (SOD) when compared with the non-continuous cropping (NC-cro) group. Transcriptome profiling found 762 differentially expressed genes, including 430 up-regulated and 332 down-regulated genes by C-cro. In addition, pathway enrichment analysis revealed that genes related to 'Tyrosine degradation I', 'Glycogen synthesis' and 'Phenylalanine and tyrosine catabolism' were up-regulated, and genes associated with 'Signal transduction', 'Immune system', etc. were down-regulated by C-cro. The expression of target genes was further validated by Q-PCR. In this study, we demonstrated the effects of C-cro on C. tangshen at the transcriptome level, and found possible C-cro responsive candidate genes. These findings could be further beneficial for improving the continuous cropping tolerance. |
| 资助项目 | Technical Innovation Program of Hubei Province[2018ZYYD013] |
| WOS研究方向 | Plant Sciences |
| 语种 | 英语 |
| WOS记录号 | WOS:000475997300028 |
| 出版者 | ELSEVIER FRANCE-EDITIONS SCIENTIFIQUES MEDICALES ELSEVIER |
| 源URL | [http://202.127.146.157/handle/2RYDP1HH/8412]  |
| 专题 | 中国科学院武汉植物园 |
| 通讯作者 | Wang, Mo; Li, Huiying |
| 作者单位 | 1.Hubei Acad Agr Sci, Inst Chinese Herbal Med, Enshi City 445000, Hubei, Peoples R China 2.Huazhong Agr Univ, Coll Plant Sci & Technol, Wuhan 430070, Hubei, Peoples R China 3.Chinese Acad Sci, Key Lab Plant Germplasm Enhancement & Specialty A, Wuhan Bot Garden, Wuhan 430074, Hubei, Peoples R China |
| 推荐引用方式 GB/T 7714 | He, Yinsheng,Zhang, Meide,Zhou, Wuxian,et al. Transcriptome analysis reveals novel insights into the continuous cropping induced response in Codonopsis tangshen, a medicinal herb[J]. PLANT PHYSIOLOGY AND BIOCHEMISTRY,2019,141:279-290. |
| APA | He, Yinsheng.,Zhang, Meide.,Zhou, Wuxian.,Ai, Lunqiang.,You, Jinwen.,...&Li, Huiying.(2019).Transcriptome analysis reveals novel insights into the continuous cropping induced response in Codonopsis tangshen, a medicinal herb.PLANT PHYSIOLOGY AND BIOCHEMISTRY,141,279-290. |
| MLA | He, Yinsheng,et al."Transcriptome analysis reveals novel insights into the continuous cropping induced response in Codonopsis tangshen, a medicinal herb".PLANT PHYSIOLOGY AND BIOCHEMISTRY 141(2019):279-290. |
入库方式： OAI收割
来源：武汉植物园
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