Plastome sequencing of Myripnois dioica and comparison within Asteraceae
文献类型：期刊论文
| 作者 | Lin, Nan1,2,3; Zhang, Xu1,2; Deng, Tao3; Zhang, Jianwen3; Meng, Aiping1; Wang, Hengchang1; Sun, Hang3; Sun, Yanxia1 |
| 刊名 | PLANT DIVERSITY
 |
| 出版日期 | 2019-10-01 |
| 卷号 | 41期号:5页码:315-322 |
| 关键词 | Myripnois Asteraceae Plastomes Large inversion Phylogenomic analyses |
| ISSN号 | 2096-2703 |
| DOI | 10.1016/j.pld.2019.07.003 |
| 英文摘要 | Myripnois is a monotypic shrub genus in the daisy family constricted to northern China. Although wild populations of Myripnois dioica are relatively rare, this plant may potentially be cultured as a fine ornamental. In the present study, we sequenced the complete plastome of M. dioica, generating the first plastome sequences of the subfamily Pertyoideae. The plastome of M. dioica has a typical quadripartite circular structure. A large similar to 20-kb and a small similar to 3-kb inversion were detected in the large single copy (LSC) region and shared by other Asteraceae species. Plastome phylogenomic analyses based on 78 Asteraceae species and three outgroups revealed four groups, corresponding to four Asteraceae subfamilies: Asteroideae, Cichorioideae, Pertyoideae and Carduoideae. Among these four subfamilies, Pertyoideae is sister to Asteroideae thorn Cichorioideae; Carduoideae is the most basal clade. In addition, we characterized 13 simple sequence repeats (SSRs) that may be useful in future studies on population genetics. Copyright (C) 2019 Kunming Institute of Botany, Chinese Academy of Sciences. Publishing services by Elsevier B.V. on behalf of KeAi Communications Co., Ltd. |
| 资助项目 | Strategic Priority Research Program of Chinese Academy of Sciences[XDA20050203] ; National Key R&D Program of China[2017YFC0505200] ; National Natural Science Foundation of China[31590823] ; National Natural Science Foundation of China[31570213] |
| WOS研究方向 | Plant Sciences |
| 语种 | 英语 |
| WOS记录号 | WOS:000497462900004 |
| 出版者 | KEAI PUBLISHING LTD |
| 源URL | [http://202.127.146.157/handle/2RYDP1HH/14482]  |
| 专题 | 中国科学院武汉植物园 |
| 通讯作者 | Sun, Hang; Sun, Yanxia |
| 作者单位 | 1.Chinese Acad Sci, CAS Key Lab Plant Germplasm Enhancement & Special, Wuhan Bot Garden, Wuhan 430074, Hubei, Peoples R China 2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 3.Chinese Acad Sci, Kunming Inst Bot, CAS Key Lab Plant Divers & Biogeog East Asia, Kunming 650201, Yunnan, Peoples R China |
| 推荐引用方式 GB/T 7714 | Lin, Nan,Zhang, Xu,Deng, Tao,et al. Plastome sequencing of Myripnois dioica and comparison within Asteraceae[J]. PLANT DIVERSITY,2019,41(5):315-322. |
| APA | Lin, Nan.,Zhang, Xu.,Deng, Tao.,Zhang, Jianwen.,Meng, Aiping.,...&Sun, Yanxia.(2019).Plastome sequencing of Myripnois dioica and comparison within Asteraceae.PLANT DIVERSITY,41(5),315-322. |
| MLA | Lin, Nan,et al."Plastome sequencing of Myripnois dioica and comparison within Asteraceae".PLANT DIVERSITY 41.5(2019):315-322. |
入库方式： OAI收割
来源：武汉植物园
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