Superoxide dismutase and ascorbate peroxidase genes in Antarctic endemic brown alga Ascoseira mirabilis (Ascoseirales, Phaeophyceae): data mining of a de novo transcriptome
文献类型：期刊论文
| 作者 | Liu, Chenlin2,3; Wang, Xiuliang1,3 |
| 刊名 | BOTANICA MARINA
 |
| 出版日期 | 2020-12-01 |
| 卷号 | 63期号:6页码:541-549 |
| 关键词 | Antarctic brown alga ascorbate peroxidase Ascoseira mirabilis superoxide dismutase transcriptomic analysis |
| ISSN号 | 0006-8055 |
| DOI | 10.1515/bot-2020-0025 |
| 通讯作者 | Liu, Chenlin(ch.lliu@163.com) |
| 英文摘要 | The Antarctic endemic brown alga Ascoseira mirabilis is physically and physiologically well adapted to the extreme polar environment. To better understand the molecular strategies associated with stress adaptation, the transcriptome of A. mirabilis was sequenced, and its antioxidant enzyme genes were identified and compared with other algae. A total of 126,576 unigenes with a mean length of 734 bp and N50 of 1174 bp was assembled from the transcriptome data. Phylogenetic analysis revealed that dramatic evolutionary changes had occurred in the brown algal superoxide dismutases (SODs) and class I peroxidases that were not consistent with the phylogeny of the species. Fe/Mn SODs are more prevalent in brown algae than in red and green algae. Two additional Fe-SODs in A. mirabilis were phylogenetically closely related to those of green algae, but not to those in other brown algae. We also identified three A. mirabilis ascorbate peroxidase (APx) genes that had a different origin from other brown algal APxs. The SOD and APx genes specifically identified in A. mirabilis will be crucial for understanding the evolution of the algal antioxidant enzymes that contribute to ecological success under extreme environmental conditions in the Antarctic region. |
| 资助项目 | 34th Chinese National Antarctic Research Exploration with the Xiangyanghong 01 scientific expedition vessel[JDKC0518013] ; National Key R&D programme of China[2018YFC1406705] |
| WOS研究方向 | Plant Sciences ; Marine & Freshwater Biology |
| 语种 | 英语 |
| WOS记录号 | WOS:000594530500006 |
| 出版者 | WALTER DE GRUYTER GMBH |
| 源URL | [http://ir.qdio.ac.cn/handle/337002/169432]  |
| 专题 | 中国科学院海洋研究所 |
| 通讯作者 | Liu, Chenlin |
| 作者单位 | 1.Chinese Acad Sci, Inst Oceanol, Qingdao 266071, Peoples R China 2.Minist Nat Resources, Key Lab Marine Ecol Environm Sci & Technol, Qingdao 266061, Peoples R China 3.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao 266000, Peoples R China |
| 推荐引用方式 GB/T 7714 | Liu, Chenlin,Wang, Xiuliang. Superoxide dismutase and ascorbate peroxidase genes in Antarctic endemic brown alga Ascoseira mirabilis (Ascoseirales, Phaeophyceae): data mining of a de novo transcriptome[J]. BOTANICA MARINA,2020,63(6):541-549. |
| APA | Liu, Chenlin,&Wang, Xiuliang.(2020).Superoxide dismutase and ascorbate peroxidase genes in Antarctic endemic brown alga Ascoseira mirabilis (Ascoseirales, Phaeophyceae): data mining of a de novo transcriptome.BOTANICA MARINA,63(6),541-549. |
| MLA | Liu, Chenlin,et al."Superoxide dismutase and ascorbate peroxidase genes in Antarctic endemic brown alga Ascoseira mirabilis (Ascoseirales, Phaeophyceae): data mining of a de novo transcriptome".BOTANICA MARINA 63.6(2020):541-549. |
入库方式： OAI收割
来源：海洋研究所
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