Complete mitochondrial genome of the harmful algal bloom species Thalassiosira nordenskioeldii (Mediophyceae, Bacillariophyta) from the east China sea
文献类型：期刊论文
| 作者 | Liu, Kuiyan1,2,3,5; Liu, Shuya1,2,5; Chen, Yang1,2,3,5 ; Liu, Feng1,2,5; Chen, Nansheng1,2,4,5
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| 刊名 | MITOCHONDRIAL DNA PART B-RESOURCES
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| 出版日期 | 2021-04-03 |
| 卷号 | 6期号:4页码:1421-1423 |
| 关键词 | Diatoms HAB species mitochondrial genome Thalassiosira nordenskioeldii |
| DOI | 10.1080/23802359.2021.1911715 |
| 通讯作者 | Chen, Nansheng(chenn@qdio.ac.cn) |
| 英文摘要 | Thalassiosira nordenskioeldii is a common harmful algal bloom (HAB) species with worldwide distribution. Although barcode sequences of this ecologically important species have been published, no genome data have been published for T. nordenskioeldii. In this study, we constructed the complete mitochondrial genome (mtDNA) of a T. nordenskioeldii strain isolated from the East China Sea. The T. nordenskioeldii mtDNA is circular and has a length of 47,038 bp and a GC content of 30.84%. The mtDNA encodes 69 genes, including 40 protein-coding (PCGs), 27 tRNA and two rRNA genes. Phylogenetic analysis using concatenated amino acid sequences of 31 shared PCGs from 37 diatom mtDNAs revealed that the mtDNA of T. nordenskioeldii was fully resolved in a clade with that of Thalassiosira profunda. The mtDNA of T. nordenskioeldii showed high collinearity with those of T. profunda and Skeletonema marinoi with only minor rearrangements. The completion of Thalassiosira mtDNAs will facilitate evolutionary studies on species of the order Thalassiosirales and the class Mediophyceae. |
| 资助项目 | Strategic Priority Research Program of Chinese Academy of Sciences[XDB42000000] ; Chinese Academy of Sciences ; Pioneer Hundred Talents Program ; Taishan Scholar Project Special Fund ; Qingdao Innovation and Creation Plan (Talent Development Program-5th Annual Pioneer and Innovator Leadership Award)[193-2-16-zhc] ; Key Research Program of Frontier Sciences, Chinese Academy of Sciences[QYZDB-SSW-DQC023] ; Major Scientific and Technological Innovation Project of Shandong Province[2019JZZY020706] ; National Natural Science Foundation of China (NSFC) Open Research Cruise - Shiptime Sharing Project of NSFC[NORC2019-01] |
| WOS研究方向 | Genetics & Heredity |
| 语种 | 英语 |
| WOS记录号 | WOS:000640399800001 |
| 出版者 | TAYLOR & FRANCIS LTD |
| 源URL | [http://ir.qdio.ac.cn/handle/337002/170552]  |
| 专题 | 海洋研究所_海洋生态与环境科学重点实验室 |
| 通讯作者 | Chen, Nansheng |
| 作者单位 | 1.Chinese Acad Sci, Inst Oceanol, CAS Key Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China 2.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China 3.Univ Chinese Acad Sci, Sch Earth & Planetary, Beijing, Peoples R China 4.Simon Fraser Univ, Dept Mol Biol & Biochem, Burnaby, BC, Canada 5.Chinese Acad Sci, Ctr Ocean Megasci, Qingdao, Peoples R China |
| 推荐引用方式 GB/T 7714 | Liu, Kuiyan,Liu, Shuya,Chen, Yang,et al. Complete mitochondrial genome of the harmful algal bloom species Thalassiosira nordenskioeldii (Mediophyceae, Bacillariophyta) from the east China sea[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2021,6(4):1421-1423. |
| APA | Liu, Kuiyan,Liu, Shuya,Chen, Yang,Liu, Feng,&Chen, Nansheng.(2021).Complete mitochondrial genome of the harmful algal bloom species Thalassiosira nordenskioeldii (Mediophyceae, Bacillariophyta) from the east China sea.MITOCHONDRIAL DNA PART B-RESOURCES,6(4),1421-1423. |
| MLA | Liu, Kuiyan,et al."Complete mitochondrial genome of the harmful algal bloom species Thalassiosira nordenskioeldii (Mediophyceae, Bacillariophyta) from the east China sea".MITOCHONDRIAL DNA PART B-RESOURCES 6.4(2021):1421-1423. |
入库方式： OAI收割
来源：海洋研究所
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