Complete mitochondrial genome of Thalassiosira profunda (Mediophyceae, Bacillariophyta)
文献类型：期刊论文
| 作者 | Liu, Kuiyan2,3,4,5; Liu, Shuya2,3,5; Chen, Yang2,3,4,5 ; Liu, Feng2,3,5; Zhao, Yongfang3,5,6; Chen, Nansheng1,2,3,5
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| 刊名 | MITOCHONDRIAL DNA PART B-RESOURCES
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| 出版日期 | 2021-04-03 |
| 卷号 | 6期号:4页码:1560-1562 |
| 关键词 | Diatoms mitochondrial genome Thalassiosira profunda |
| DOI | 10.1080/23802359.2021.1916409 |
| 通讯作者 | Chen, Nansheng(chenn@qdio.ac.cn) |
| 英文摘要 | Thalassiosira is a species-rich genus with about 170 described species, many of which are harmful algal species with significant negative ecological impact. However, genome data of these species remain limited. In this study, the complete mitochondrial genome of Thalassiosira profunda (Hendey) Hasle 1973 was determined for the first time. The circular genome was 40,470 bp in length with GC content of 30.98%. It encodes 63 genes including 36 protein-coding genes (PCGs), 25 tRNA genes, and two rRNA genes. Phylogenetic analysis using concatenated PCGs suggested that T. profunda had a closer evolutionary relationship with Skeletonema marinoi of a different family (Skeletonemataceae) than Thalassiosira pseudonana, suggesting complex evolutionary relationship among species in these two families. Colinearity analysis also revealed fewer genome rearrangements between T. profunda and S. marinoi than that between T. profunda and T. pseudonana. This study suggests that mitochondrial genomes of many more species in the Thalassiosiraceae and Skeletonemataceae families are needed to disentangle the complex evolutionary relationships in the order of Thalassiosirales. |
| 资助项目 | Strategic Priority Research Program of Chinese Academy of Sciences[XDB42000000] ; Chinese Academy of Sciences ; Pioneer Hundred Talents Program ; Taishan Scholar Project Special Fund ; Qingdao Innovation and Creation Plan [Talent Development Program-5th Annual Pioneer and Innovator Leadership Award][193-2-16-zhc] ; Key Research Program of Frontier Sciences, Chinese Academy of Sciences[QYZDB-SSW-DQC023] ; Major Scientific and Technological Innovation Project of Shandong Province[2019JZZY020706] |
| WOS研究方向 | Genetics & Heredity |
| 语种 | 英语 |
| 出版者 | TAYLOR & FRANCIS LTD |
| WOS记录号 | WOS:000644571300001 |
| 源URL | [http://ir.qdio.ac.cn/handle/337002/170838]  |
| 专题 | 海洋研究所_海洋生态与环境科学重点实验室 海洋研究所_胶州湾海洋生态系统国家野外研究站 |
| 通讯作者 | Chen, Nansheng |
| 作者单位 | 1.Simon Fraser Univ, Dept Mol Biol & Biochem, Burnaby, BC, Canada 2.Chinese Acad Sci, Inst Oceanol, CAS Key Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China 3.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China 4.Univ Chinese Acad Sci, Sch Earth & Planetary, Beijing, Peoples R China 5.Chinese Acad Sci, Ctr Ocean Mega Sci, Qingdao, Peoples R China 6.Chinese Acad Sci, Inst Oceanol, Jiaozhou Bay Natl Marine Ecosyst Res Stn, Qingdao, Peoples R China |
| 推荐引用方式 GB/T 7714 | Liu, Kuiyan,Liu, Shuya,Chen, Yang,et al. Complete mitochondrial genome of Thalassiosira profunda (Mediophyceae, Bacillariophyta)[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2021,6(4):1560-1562. |
| APA | Liu, Kuiyan,Liu, Shuya,Chen, Yang,Liu, Feng,Zhao, Yongfang,&Chen, Nansheng.(2021).Complete mitochondrial genome of Thalassiosira profunda (Mediophyceae, Bacillariophyta).MITOCHONDRIAL DNA PART B-RESOURCES,6(4),1560-1562. |
| MLA | Liu, Kuiyan,et al."Complete mitochondrial genome of Thalassiosira profunda (Mediophyceae, Bacillariophyta)".MITOCHONDRIAL DNA PART B-RESOURCES 6.4(2021):1560-1562. |
入库方式： OAI收割
来源：海洋研究所
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