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Diversity and distribution of viruses inhabiting the deepest ocean on Earth

文献类型：期刊论文

作者Jian, Huahua1,2; Yi, Yi1; Wang, Jiahua1; Hao, Yali1; Zhang, Mujie1; Wang, Siyuan1; Meng, Canxing1; Zhang, Yue1; Jing, Hongmei3; Wang, Yinzhao1,2
刊名ISME JOURNAL
出版日期2021-05-10
页码17
ISSN号1751-7362
DOI10.1038/s41396-021-00994-y
英文摘要As the most abundant biological entities on the planet, viruses significantly influence the overall functioning of marine ecosystems. The abundance, distribution, and biodiversity of viral communities in the upper ocean have been relatively well studied, but our understanding of viruses in the hadal biosphere remains poor. Here, we established the oceanic trench viral genome dataset (OTVGD) by analysing 19 microbial metagenomes derived from seawater and sediment samples of the Mariana, Yap, and Kermadec Trenches. The trench viral communities harbored remarkably high novelty, and they were predicted to infect ecologically important microbial clades, including Thaumarchaeota and Oleibacter. Significant inter-trench and intra-trench exchange of viral communities was proposed. Moreover, viral communities in different habitats (seawater/sediment and depth-stratified ocean zones) exhibited distinct niche-dependent distribution patterns and genomic properties. Notably, microbes and viruses in the hadopelagic seawater seemed to preferably adopt lysogenic lifestyles compared to those in the upper ocean. Furthermore, niche-specific auxiliary metabolic genes were identified in the hadal viral genomes, and a novel viral D-amino acid oxidase was functionally and phylogenetically characterized, suggesting the contribution of these genes in the utilization of refractory organic matter. Together, these findings highlight the genomic novelty, dynamic movement, and environment-driven diversification of viral communities in oceanic trenches, and suggest that viruses may influence the hadal ecosystem by reprogramming the metabolism of their hosts and modulating the community of keystone microbes.
WOS关键词SP NOV. ; MICROBIAL COMMUNITY ; CHALLENGER DEEP ; HADAL BIOSPHERE ; MARIANA TRENCH ; SEA ; SEDIMENTS ; BACTERIA ; ALIGNMENT ; GENOMES
资助项目National Key R&D Program of China[2018YFC0309800] ; National Natural Science Foundation of China[91851113] ; National Natural Science Foundation of China[41921006] ; National Natural Science Foundation of China[41776173] ; National Natural Science Foundation of China[41676118]
WOS研究方向Environmental Sciences & Ecology ; Microbiology
语种英语
出版者SPRINGERNATURE
WOS记录号WOS:000648851600002
资助机构National Key R&D Program of China ; National Natural Science Foundation of China
源URL[http://ir.idsse.ac.cn/handle/183446/8605]  
专题深海科学研究部_深海生物学研究室_海洋微生物分子生态学研究组
通讯作者Xiao, Xiang
作者单位1.Shanghai Jiao Tong Univ, State Key Lab Microbial Metab, Joint Int Res Lab Metab & Dev Sci, Sch Life Sci & Biotechnol, Shanghai, Peoples R China
2.Southern Marine Sci & Engn Guangdong Lab Zhuhai, Zhuhai, Peoples R China
3.Chinese Acad Sci, CAS Key Lab Expt Study Deep Sea Extreme Condit, Inst Deep Sea Sci & Engn, Sanya, Peoples R China
推荐引用方式
GB/T 7714		 Jian, Huahua,Yi, Yi,Wang, Jiahua,et al. Diversity and distribution of viruses inhabiting the deepest ocean on Earth[J]. ISME JOURNAL,2021:17.
APA Jian, Huahua.,Yi, Yi.,Wang, Jiahua.,Hao, Yali.,Zhang, Mujie.,...&Xiao, Xiang.(2021).Diversity and distribution of viruses inhabiting the deepest ocean on Earth.ISME JOURNAL,17.
MLA Jian, Huahua,et al."Diversity and distribution of viruses inhabiting the deepest ocean on Earth".ISME JOURNAL (2021):17.

入库方式： OAI收割

来源：深海科学与工程研究所

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