Comparative mitochondrial genome analysis of Neodontobutis hainanensis and Perccottus glenii reveals conserved genome organization and phylogeny
文献类型：期刊论文
| 作者 | Lv, Wenqi1,2; Jiang, Haifeng3; Bo, Jing2,4 ; Wang, Cheng1,2; Yang, Liandong1; He, Shunping1,4
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| 刊名 | GENOMICS
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| 出版日期 | 2020-11-01 |
| 卷号 | 112期号:6页码:3862-3870 |
| 关键词 | Mitogenome N. hainanensis P. glenii Phylogenetic relationship Divergence time Selective pressure |
| ISSN号 | 0888-7543 |
| DOI | 10.1016/j.ygeno.2020.06.039 |
| 英文摘要 | To investigate the molecular evolution of mitochondrial genomes among the family Odontobutidae, the complete mitochondrial genomes of Neodontobutis hainanensis and Perccottus glenii were sequenced and compared with seven odontobutids species. The genome organization, base composition, codon usage, and gene arrangement of N. hainanensis exhibited high similarity to P. glenii compared to those of other Odontobutidae species. Reconstructed phylogenetic analyses of Odontobutidae strongly supported that Neodontobutis and Perccottus formed a unifying group sister to Odontobutis. Our molecular dating time revealed that the two species diverged approximately 21.7 Ma during Miocene, later than that of Odontobutis. Selection analyses showed stronger selective constraints in mitochondrial genes for P. glenii. However, two positively selected sites in NADH4 and NADH6 genes were respectively detected in N. hainanensis and P. glenii, indicating that they might evolve different metabolic performance in response to the contrasting environments. |
| WOS关键词 | MOLECULAR PHYLOGENY ; TRANSFER-RNAS ; FISHES PERCIFORMES ; GENE REARRANGEMENT ; ODONTOBUTIDAE ; GOBIOIDEI ; SELECTION ; SEQUENCE ; INTERRUPTA ; TELEOSTEI |
| 资助项目 | National Natural Science Foundation of China[31972866] |
| WOS研究方向 | Biotechnology & Applied Microbiology ; Genetics & Heredity |
| 语种 | 英语 |
| WOS记录号 | WOS:000600725100004 |
| 出版者 | ACADEMIC PRESS INC ELSEVIER SCIENCE |
| 资助机构 | National Natural Science Foundation of China |
| 源URL | [http://ir.idsse.ac.cn/handle/183446/8463]  |
| 专题 | 深海科学研究部_深海生物学研究室_深海鱼类物种与基因组多样性的研究 |
| 通讯作者 | Yang, Liandong; He, Shunping |
| 作者单位 | 1.Chinese Acad Sci, Key Lab Aquat Biodivers & Conservat Chinese Acad, Inst Hydrobiol, Wuhan 430072, Peoples R China 2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 3.Northwest A&F Univ, Coll Anim Sci & Technol, Yangling 712100, Shaanxi, Peoples R China 4.Chinese Acad Sci, Inst Deep Sea Sci & Engn, Sanya 572000, Peoples R China |
| 推荐引用方式 GB/T 7714 | Lv, Wenqi,Jiang, Haifeng,Bo, Jing,et al. Comparative mitochondrial genome analysis of Neodontobutis hainanensis and Perccottus glenii reveals conserved genome organization and phylogeny[J]. GENOMICS,2020,112(6):3862-3870. |
| APA | Lv, Wenqi,Jiang, Haifeng,Bo, Jing,Wang, Cheng,Yang, Liandong,&He, Shunping.(2020).Comparative mitochondrial genome analysis of Neodontobutis hainanensis and Perccottus glenii reveals conserved genome organization and phylogeny.GENOMICS,112(6),3862-3870. |
| MLA | Lv, Wenqi,et al."Comparative mitochondrial genome analysis of Neodontobutis hainanensis and Perccottus glenii reveals conserved genome organization and phylogeny".GENOMICS 112.6(2020):3862-3870. |
入库方式： OAI收割
来源：深海科学与工程研究所
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