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Microbial macroecology: In search of mechanisms governing microbial biogeographic patterns

文献类型：期刊论文

作者Xu, Xiaofeng; Wang, Nannan1,7; Lipson, David; Sinsabaugh, Robert6; Schimel, Josh5; He, Liyuan; Soudzilovskaia, Nadejda A.; Tedersoo, Leho3
刊名GLOBAL ECOLOGY AND BIOGEOGRAPHY
出版日期2020
卷号29期号:11页码:1870-1886
ISSN号1466-822X
关键词biogeography macroecology microbes pattern soil
DOI10.1111/geb.13162
文献子类Article
英文摘要Introduction Rapidly advancing technologies and accumulating information about microbial communities across the globe allow the quantification of microbial properties and functions at a macro-scale. These emerging microbial biogeographic patterns call for a practical macroecological approach to investigate their underlying mechanisms. Aims The primary aims of this paper are to review the advancements of microbial macroecology in seeking mechanisms governing microbial biogeographic patterns, and to further lay out a roadmap for microbial macroecology in 10 years. Methods We reviewed the progress of microbial macroecology and demonstrated the application of the microbial macroecological approach to microbial biogeographic patterns with three case studies. Results Microbial macroecology provides a platform for understanding microbial abundance, community structure, and functioning across space, time, and taxonomic hierarchy. It emphasizes the integral effects of environmental filtering, microbial responses, diversification, dispersal, and local extinction that drive the microbial biogeographic patterns. The microbial macroecological approach emphasizes the last two stages of the four-stage scientific method applied to microbial ecology: (a) describing microbial traits across scales to reveal patterns, (b) mathematically representing these patterns, (c) developing and testing conceptual models to build a mechanistic understanding of these patterns from a macroecological perspective, (d) plugging the new knowledge into the theoretical advancements. Three case studies were used to demonstrate the microbial macroecological approach for understanding the global patterns of microbial biomass carbon, microbial composition (fungi : bacteria ratio), and microbial carbon use efficiency. Conclusions Microbial macroecology offers a platform for understanding the mechanisms that drive biogeographic patterns of microbial abundance, diversity and functions. It is likely that these patterns and mechanisms will be increasingly incorporated into predictive models that link climate, carbon dynamics, and biogeochemical processes. A roadmap is outlined for the growing microbial macroecology field; we expect significant progress will be made in five research directions over the next 10 years.
学科主题Ecology ; Geography, Physical
电子版国际标准刊号1466-8238
出版地HOBOKEN
WOS关键词CARBON-USE EFFICIENCY ; BETA-DIVERSITY ; BACTERIAL COMMUNITIES ; DISPERSAL LIMITATION ; AREA RELATIONSHIP ; GLOBAL PATTERNS ; SOIL ; FUNGAL ; STOICHIOMETRY ; EVOLUTION
WOS研究方向Environmental Sciences & Ecology ; Physical Geography
语种英语
出版者WILEY
WOS记录号WOS:000555280600001
资助机构CSU Program for Education & Research in Biotechnology ; Biological and Environmental Research ; San Diego State University ; Top Notch program in China
源URL[http://ir.ibcas.ac.cn/handle/2S10CLM1/19340]  
专题植被与环境变化国家重点实验室
作者单位1.San Diego State Univ, Dept Biol, San Diego, CA 92182 USA
2.Univ Tartu, Inst Ecol & Earth Sci, Tartu, Estonia
3.Soudzilovskaia, Nadejda A.] Leiden Univ, Inst Environm Sci, Environm Biol Dept, CML, Leiden, Netherlands
4.Univ Calif Santa Barbara, Dept Ecol Evolut & Marine Biol, Santa Barbara, CA 93106 USA
5.Univ New Mexico, Dept Biol, Albuquerque, NM 87131 USA
6.Chinese Acad Sci, Inst Bot, Beijing, Peoples R China
7.Chinese Acad Sci, Northeast Inst Geog & Agroecol, Changchun, Peoples R China
推荐引用方式
GB/T 7714		 Xu, Xiaofeng,Wang, Nannan,Lipson, David,et al. Microbial macroecology: In search of mechanisms governing microbial biogeographic patterns[J]. GLOBAL ECOLOGY AND BIOGEOGRAPHY,2020,29(11):1870-1886.
APA Xu, Xiaofeng.,Wang, Nannan.,Lipson, David.,Sinsabaugh, Robert.,Schimel, Josh.,...&Tedersoo, Leho.(2020).Microbial macroecology: In search of mechanisms governing microbial biogeographic patterns.GLOBAL ECOLOGY AND BIOGEOGRAPHY,29(11),1870-1886.
MLA Xu, Xiaofeng,et al."Microbial macroecology: In search of mechanisms governing microbial biogeographic patterns".GLOBAL ECOLOGY AND BIOGEOGRAPHY 29.11(2020):1870-1886.

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来源：植物研究所

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