Characterization of the complete chloroplast genome sequence of Gymnocoronis spilanthoides (Asteraceae, Eupatorieae) and its phylogenetic implications
文献类型：期刊论文
| 作者 | Fu, Zhi-Xi; Wang, Xiu-Hua; Ou, Chuan-Zhou; Lu, Xin6; Hu, Jun1; He, Gang2; Tian, Xiang-Yu |
| 刊名 | MITOCHONDRIAL DNA PART B-RESOURCES
 |
| 出版日期 | 2019 |
| 卷号 | 4期号:1页码:694-695 |
| 关键词 | Gymnocoronis spilanthoides chloroplast genome phylogenomics analysis |
| ISSN号 | 2380-2359 |
| DOI | 10.1080/23802359.2019.1574622 |
| 文献子类 | Article |
| 英文摘要 | This study was the first report about complete chioroplast genome of Gymnocoronis spilanthoides (Asteraceae, Eupatorieae), a critically invasive plant. The circular whole cp genome of G. spilanthoides was 150,799 by in length, contained a large single-copy (LSC) region of 82,514 by and a small single-copy (SSC) region of 18,471 bp. These two regions were separated by a pair of inverted repeat regions (IRa and IRb), each of them 24,907 bp in length. A total of 135 functional genes were encoded, consisted of 89 protein-coding genes, 38 tRNA genes, and eight rRNA genes. The overall GC content of the chloroplast genome sequence was 37.5%, and the GC contents of the LSC, SSC, and IR regions were 35.6, 30.9, and 37.0%, respectively. The phylogenetic analysis by maximum likelihood showed that the G. spilanthoides was clustered into Glade of Mikania and Ageratina by strong support values, and thus was closely related to members of Heliantheae and Inuleae. These results will be useful for the future studies of the naturalized and potentially invasive aquatic alien in the worldwide. |
| 学科主题 | Genetics & Heredity |
| 出版地 | ABINGDON |
| WOS研究方向 | Genetics & Heredity |
| 语种 | 英语 |
| WOS记录号 | WOS:000460837400001 |
| 出版者 | TAYLOR & FRANCIS LTD |
| 资助机构 | Special Research Project of National Tradition Chinese Medicine Industry ; Fourth National Survey on Chinese Material Medica Resources, Sichuan Province [2018PC005] ; Project of Department of Laboratory and Equipment Management, Sichuan Normal University [KFSY2018031] |
| 源URL | [http://ir.ibcas.ac.cn/handle/2S10CLM1/19474]  |
| 专题 | 植物研究所_系统与进化植物学研究中心_系统与进化植物学研究中心_学位论文 |
| 作者单位 | 1.Chengdu Customs Dist, Chengdu, Sichuan, Peoples R China 2.Chinese Acad Sci, Chengdu Inst Biol, Chengdu, Sichuan, Peoples R China 3.Chengdu Univ, Dept Key Lab Med & Edible Plant Resource Dev Sich, Chengdu, Sichuan, Peoples R China 4.Beijing Normal Univ, Coll Life Sci, Beijing, Peoples R China 5.Sichuan Normal Univ, Coll Life Sci, Chengdu, Sichuan, Peoples R China 6.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing, Peoples R China |
| 推荐引用方式 GB/T 7714 | Fu, Zhi-Xi,Wang, Xiu-Hua,Ou, Chuan-Zhou,et al. Characterization of the complete chloroplast genome sequence of Gymnocoronis spilanthoides (Asteraceae, Eupatorieae) and its phylogenetic implications[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2019,4(1):694-695. |
| APA | Fu, Zhi-Xi.,Wang, Xiu-Hua.,Ou, Chuan-Zhou.,Lu, Xin.,Hu, Jun.,...&Tian, Xiang-Yu.(2019).Characterization of the complete chloroplast genome sequence of Gymnocoronis spilanthoides (Asteraceae, Eupatorieae) and its phylogenetic implications.MITOCHONDRIAL DNA PART B-RESOURCES,4(1),694-695. |
| MLA | Fu, Zhi-Xi,et al."Characterization of the complete chloroplast genome sequence of Gymnocoronis spilanthoides (Asteraceae, Eupatorieae) and its phylogenetic implications".MITOCHONDRIAL DNA PART B-RESOURCES 4.1(2019):694-695. |
入库方式： OAI收割
来源：植物研究所
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