Eight soybean reference genome resources from varying latitudes and agronomic traits
文献类型：期刊论文
| 作者 | Chu, Jeffrey Shih-Chieh1,2; Peng, Bo2; Tang, Kuanqiang1; Yi, Xingxing2,5; Zhou, Huangkai1; Wang, Huan2 ; Li, Guang1; Leng, Jiantian1; Chen, Nansheng3,4; Feng, Xianzhong1
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| 刊名 | SCIENTIFIC DATA
 |
| 出版日期 | 2021-07-01 |
| 卷号 | 8期号:1页码:8 |
| DOI | 10.1038/s41597-021-00947-2 |
| 通讯作者 | Chen, Nansheng(chenn@qdio.ac.cn) ; Feng, Xianzhong(fengxianzhong@iga.ac.cn) |
| 英文摘要 | Comparative analysis of multiple reference genomes representing diverse genetic backgrounds is critical for understanding the role of key alleles important in domestication and genetic breeding of important crops such as soybean. To enrich the genetic resources for soybean, we describe the generation, technical assessment, and preliminary genomic variation analysis of eight de novo reference-grade soybean genome assemblies from wild and cultivated accessions. These resources represent soybeans cultured at different latitudes and exhibiting different agronomical traits. Of these eight soybeans, five are from new accessions that have not been sequenced before. We demonstrate the usage of these genomes to identify small and large genomic variations affecting known genes as well as screening for genic PAV regions for identifying candidates for further functional studies. |
| 资助项目 | National Key Research and Development Project from the Ministry of Science and Technology of China[2016YFD0101900] ; Key Research Program of Chinese Academy of Sciences[593-ZDRW-ZS-2019-2-02] ; CAS Pioneer Hundred Talents Program ; Taishan Scholar Project Special Fund |
| WOS研究方向 | Science & Technology - Other Topics |
| 语种 | 英语 |
| WOS记录号 | WOS:000671793600002 |
| 出版者 | NATURE RESEARCH |
| 源URL | [http://ir.qdio.ac.cn/handle/337002/176978]  |
| 专题 | 中国科学院海洋研究所 |
| 通讯作者 | Chen, Nansheng; Feng, Xianzhong |
| 作者单位 | 1.Chinese Acad Sci, Northeast Inst Geog & Agroecol, Changchun, Peoples R China 2.Wuhan Frasergen Bioinformat Inc, East Lake High Tech Zone, Wuhan, Peoples R China 3.Chinese Acad Sci, Inst Oceanol, Qingdao, Peoples R China 4.Simon Fraser Univ, Dept Mol Biol & Biochem, Burnaby, BC, Canada 5.Huazhong Agr Univ, Coll Life Sci & Technol, Wuhan, Peoples R China |
| 推荐引用方式 GB/T 7714 | Chu, Jeffrey Shih-Chieh,Peng, Bo,Tang, Kuanqiang,et al. Eight soybean reference genome resources from varying latitudes and agronomic traits[J]. SCIENTIFIC DATA,2021,8(1):8. |
| APA | Chu, Jeffrey Shih-Chieh.,Peng, Bo.,Tang, Kuanqiang.,Yi, Xingxing.,Zhou, Huangkai.,...&Feng, Xianzhong.(2021).Eight soybean reference genome resources from varying latitudes and agronomic traits.SCIENTIFIC DATA,8(1),8. |
| MLA | Chu, Jeffrey Shih-Chieh,et al."Eight soybean reference genome resources from varying latitudes and agronomic traits".SCIENTIFIC DATA 8.1(2021):8. |
入库方式： OAI收割
来源：海洋研究所
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