Mitochondrial phylogenomics reveal the origin and adaptive evolution of the deep-sea caridean shrimps (Decapoda: Caridea)
文献类型：期刊论文
| 作者 | Sun, Shao'e1,3; Sha, Zhongli1,2,3,4 ; Wang, Yanrong1,3
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| 刊名 | JOURNAL OF OCEANOLOGY AND LIMNOLOGY
 |
| 出版日期 | 2021-06-14 |
| 页码 | 13 |
| ISSN号 | 2096-5508 |
| 关键词 | hydrothermal vents seamounts Caridea mitochondrial genome phylogenetic analysis evolutionary history |
| DOI | 10.1007/s00343-020-0266-4 |
| 通讯作者 | Sha, Zhongli(shazl@qdio.ac.cn) |
| 英文摘要 | The deep-sea is considered as the most extensive ecosystem on the Earth. It is meaningful for elucidating the life origins by exploring the origin and adaptive genetic mechanisms of the large deep-sea organisms. Caridean shrimps have colonized and successfully adapted to deep-sea environments. They provide an ideal model to analyze the origin and adaptive evolution of modern deep-sea fauna. Here, we conducted the phylogenetic analyses of mitochondrial genomes (mitogenomes) from carideans, including 11 newly sequences reported in this investigation to explore the habitat origins, divergence times, and adaptive evolution of deep-sea (seamounts and hydrothermal vents) caridean shrimps. The results showed that the species of deep-sea Caridea formed a monophyletic group. Phylogenetic analysis supported that the deep-sea caridean shrimps may originated from shallow sea. The hydrothermal vents alvinocaridid shrimps and Lebbeus shinkaiae from Thoridae underwent a second range expansion from seamounts to vent ecosystems. Estimates of divergence time showed that the caridean shrimps invaded into deep-sea at 147.75 Ma. The divergence of most of the modern seamount and hydrothermal vent species are in the late Cretaceous/early Tertiary. This may associate with the geological events of the Western Pacific, the climate change, and the global deep-water anoxic/dysoxic events during this period. Twenty-two potentially important adaptive residues were detected in the deep-sea shrimp lineage, which were located in atp6, atp8, cox1, cox3, cytb, nad2, nad4l, and nad5. This investigation adds our understanding of the evolutionary history of deep-sea caridean shrimps, and provides insights into the mitochondrial genetic basis of deep-sea adaptation in this group. |
| 资助项目 | National Science Fund for Distinguished Young Scholars[42025603] ; Key Research Program of Frontier Sciences of the Chinese Academy of Sciences[QYZDB-SSWDQC036] ; National Natural Science Foundation of China[31801961] ; Strategic Priority Research Program of the Chinese Academy of Science[XDB42030301] |
| WOS研究方向 | Marine & Freshwater Biology ; Oceanography |
| 语种 | 英语 |
| 出版者 | SCIENCE PRESS |
| WOS记录号 | WOS:000661406900009 |
| 源URL | [http://ir.qdio.ac.cn/handle/337002/176888]  |
| 专题 | 海洋研究所_深海极端环境与生命过程研究中心 |
| 通讯作者 | Sha, Zhongli |
| 作者单位 | 1.Chinese Acad Sci, Deep Sea Res Ctr, Inst Oceanol, Qingdao 266071, Peoples R China 2.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao 266071, Peoples R China 3.Chinese Acad Sci, Ctr Ocean Megasci, Qingdao 266071, Peoples R China 4.Univ Chinese Acad Sci, Beijing 100049, Peoples R China |
| 推荐引用方式 GB/T 7714 | Sun, Shao'e,Sha, Zhongli,Wang, Yanrong. Mitochondrial phylogenomics reveal the origin and adaptive evolution of the deep-sea caridean shrimps (Decapoda: Caridea)[J]. JOURNAL OF OCEANOLOGY AND LIMNOLOGY,2021:13. |
| APA | Sun, Shao'e,Sha, Zhongli,&Wang, Yanrong.(2021).Mitochondrial phylogenomics reveal the origin and adaptive evolution of the deep-sea caridean shrimps (Decapoda: Caridea).JOURNAL OF OCEANOLOGY AND LIMNOLOGY,13. |
| MLA | Sun, Shao'e,et al."Mitochondrial phylogenomics reveal the origin and adaptive evolution of the deep-sea caridean shrimps (Decapoda: Caridea)".JOURNAL OF OCEANOLOGY AND LIMNOLOGY (2021):13. |
入库方式： OAI收割
来源：海洋研究所
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