A nuclear phylogenomic study of the angiosperm order Myrtales, exploring the potential and limitations of the universal Angiosperms353 probe set
文献类型：期刊论文
| 作者 | Maurin, Olivier; Anest, Artemis23; Bellot, Sidonie; Biffin, Edward; Brewer, Grace; Charles-Dominique, Tristan; Cowan, Robyn S.; Dodsworth, Steven19; Epitawalage, Niroshini; Gallego, Berta |
| 刊名 | AMERICAN JOURNAL OF BOTANY
 |
| 出版日期 | 2021 |
| 卷号 | 108期号:7页码:1087-1111 |
| ISSN号 | 0002-9122 |
| 关键词 | Alzateaceae Combretaceae Crypteroniaceae Lythraceae Melastomataceae Myrtaceae Onagraceae Penaeaceae phylogenomics Vochysiaceae |
| DOI | 10.1002/ajb2.1699 |
| 英文摘要 | Premise To further advance the understanding of the species-rich, economically and ecologically important angiosperm order Myrtales in the rosid clade, comprising nine families, approximately 400 genera and almost 14,000 species occurring on all continents (except Antarctica), we tested the Angiosperms353 probe kit. Methods We combined high-throughput sequencing and target enrichment with the Angiosperms353 probe kit to evaluate a sample of 485 species across 305 genera (76% of all genera in the order). Results Results provide the most comprehensive phylogenetic hypothesis for the order to date. Relationships at all ranks, such as the relationship of the early-diverging families, often reflect previous studies, but gene conflict is evident, and relationships previously found to be uncertain often remain so. Technical considerations for processing HTS data are also discussed. Conclusions High-throughput sequencing and the Angiosperms353 probe kit are powerful tools for phylogenomic analysis, but better understanding of the genetic data available is required to identify genes and gene trees that account for likely incomplete lineage sorting and/or hybridization events. |
| 学科主题 | Plant Sciences |
| 语种 | 英语 |
| WOS记录号 | WOS:000676117100001 |
| 源URL | [http://ir.xtbg.org.cn/handle/353005/12326]  |
| 专题 | 西双版纳热带植物园_2012年后新成立研究组 |
| 作者单位 | 1.Wilson, Peter G.] Royal Bot Gardens Sydney, Mrs Macquaries Rd, Sydney, NSW 2000, Australia 2.Univ Arkansas, Dept Biol Sci, Fayetteville, AR 72701 USA 3.Turner, Ian M.] Royal Bot Gardens, Richmond TW9 3AB, Surrey, England 4.Tomlinson, Kyle W.] Chinese Acad Sci, Core Bot Gardens, Ctr Conservat Biol, Mengla 666303, Yunnan, Peoples R China 5.Staggemeier, Vanessa G.] Univ Fed Rio Grande do Norte, Ctr Biociencias, Dept Ecol, BR-59078970 Natal, RN, Brazil 6.Univ Estadual Campinas, Dept Plant Biol, BR-13083970 Campinas, SP, Brazil 7.UPM, INIA, Ctr Plant Biotechnol & Genom, CBGP, Autopista M-40,Km 38, Pozuelo De Alarcon 28223, Madrid, Spain 8.Univ Montpellier, Inst Agro, CIRAD, LSTM,IRD,INRAE, Montpellier, France 9.Penneys, Darin S.] Univ N Carolina, Dept Biol & Marine Biol, Wilmington, NC 28403 USA 10.Michelangeli, Fabian A.] New York Bot Garden, Inst Systemat Bot, Bronx, NY 10458 USA |
| 推荐引用方式 GB/T 7714 | Maurin, Olivier,Anest, Artemis,Bellot, Sidonie,et al. A nuclear phylogenomic study of the angiosperm order Myrtales, exploring the potential and limitations of the universal Angiosperms353 probe set[J]. AMERICAN JOURNAL OF BOTANY,2021,108(7):1087-1111. |
| APA | Maurin, Olivier.,Anest, Artemis.,Bellot, Sidonie.,Biffin, Edward.,Brewer, Grace.,...&Lucas, Eve.(2021).A nuclear phylogenomic study of the angiosperm order Myrtales, exploring the potential and limitations of the universal Angiosperms353 probe set.AMERICAN JOURNAL OF BOTANY,108(7),1087-1111. |
| MLA | Maurin, Olivier,et al."A nuclear phylogenomic study of the angiosperm order Myrtales, exploring the potential and limitations of the universal Angiosperms353 probe set".AMERICAN JOURNAL OF BOTANY 108.7(2021):1087-1111. |
入库方式： OAI收割
来源：西双版纳热带植物园
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