Transposable Elements Contribute to the Adaptation of Arabidopsis thaliana
文献类型：期刊论文
| 作者 | Li, Zi-Wen; Hou, Xing-Hui; Chen, Jia-Fu; Xu, Yong-Chao; Wu, Qiong; Gonzalez, Josefa1; Guo, Ya-Long |
| 刊名 | GENOME BIOLOGY AND EVOLUTION
 |
| 出版日期 | 2018 |
| 卷号 | 10期号:8页码:2140-2150 |
| ISSN号 | 1759-6653 |
| 关键词 | Arabidopsis thaliana population genomics adaptation transposable elements (TEs) |
| DOI | 10.1093/gbe/evy171 |
| 文献子类 | Article |
| 英文摘要 | Transposable elements (TEs) are mobile genetic elements with very high mutation rates that play important roles in shaping genome architecture and regulating phenotypic variation. However, the extent to which TEs influence the adaptation of organisms in their natural habitats is largely unknown. Here, we scanned 201 representative resequenced genomes from the model plant Arabidopsis thaliana and identified 2,311 polymorphic TEs from noncentromeric regions. We found expansion and contraction of different types of TEs in different A. thaliana populations. More importantly, we identified two TE insertions that are likely candidates to play a role in adaptive evolution. Our results highlight the importance of variations in TEs for the adaptation of plants in general in the context of rapid global climate change. |
| 学科主题 | Evolutionary Biology ; Genetics & Heredity |
| 出版地 | OXFORD |
| WOS关键词 | DROSOPHILA-MELANOGASTER ; POSITIVE SELECTION ; GENOME EVOLUTION ; GENE-EXPRESSION ; DISCOVERY ; INSERTION ; RESISTANCE ; RESPONSES ; SEQUENCE ; MUTATION |
| 语种 | 英语 |
| 出版者 | OXFORD UNIV PRESS |
| WOS记录号 | WOS:000444553900024 |
| 资助机构 | National Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [91231104, 31470331, 31222006] ; 100 Talents Program of the Chinese Academy of SciencesChinese Academy of Sciences ; European CommissionEuropean CommissionEuropean Commission Joint Research Centre [H2020-ERC-2014-CoG-647900] ; Spanish Ministry of Science, Innovation, and Universities [BFU2014-57779-P, BFU2017-82937-P] |
| 源URL | [http://ir.ibcas.ac.cn/handle/2S10CLM1/20625]  |
| 专题 | 系统与进化植物学国家重点实验室 |
| 作者单位 | 1.Univ Chinese Acad Sci, Coll Life Sci, Beijing, Peoples R China 2.Univ Pompeu Fabra, CSIC, Inst Evolutionary Biol, Barcelona, Spain 3.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing, Peoples R China |
| 推荐引用方式 GB/T 7714 | Li, Zi-Wen,Hou, Xing-Hui,Chen, Jia-Fu,et al. Transposable Elements Contribute to the Adaptation of Arabidopsis thaliana[J]. GENOME BIOLOGY AND EVOLUTION,2018,10(8):2140-2150. |
| APA | Li, Zi-Wen.,Hou, Xing-Hui.,Chen, Jia-Fu.,Xu, Yong-Chao.,Wu, Qiong.,...&Guo, Ya-Long.(2018).Transposable Elements Contribute to the Adaptation of Arabidopsis thaliana.GENOME BIOLOGY AND EVOLUTION,10(8),2140-2150. |
| MLA | Li, Zi-Wen,et al."Transposable Elements Contribute to the Adaptation of Arabidopsis thaliana".GENOME BIOLOGY AND EVOLUTION 10.8(2018):2140-2150. |
入库方式： OAI收割
来源：植物研究所
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