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Transposable Elements Contribute to the Adaptation of Arabidopsis thaliana

文献类型：期刊论文

作者Li, Zi-Wen; Hou, Xing-Hui; Chen, Jia-Fu; Xu, Yong-Chao; Wu, Qiong; Gonzalez, Josefa1; Guo, Ya-Long
刊名GENOME BIOLOGY AND EVOLUTION
出版日期2018
卷号10期号:8页码:2140-2150
关键词Arabidopsis thaliana population genomics adaptation transposable elements (TEs)
ISSN号1759-6653
DOI10.1093/gbe/evy171
文献子类Article
英文摘要Transposable elements (TEs) are mobile genetic elements with very high mutation rates that play important roles in shaping genome architecture and regulating phenotypic variation. However, the extent to which TEs influence the adaptation of organisms in their natural habitats is largely unknown. Here, we scanned 201 representative resequenced genomes from the model plant Arabidopsis thaliana and identified 2,311 polymorphic TEs from noncentromeric regions. We found expansion and contraction of different types of TEs in different A. thaliana populations. More importantly, we identified two TE insertions that are likely candidates to play a role in adaptive evolution. Our results highlight the importance of variations in TEs for the adaptation of plants in general in the context of rapid global climate change.
学科主题Evolutionary Biology ; Genetics & Heredity
出版地OXFORD
WOS关键词DROSOPHILA-MELANOGASTER ; POSITIVE SELECTION ; GENOME EVOLUTION ; GENE-EXPRESSION ; DISCOVERY ; INSERTION ; RESISTANCE ; RESPONSES ; SEQUENCE ; MUTATION
语种英语
WOS记录号WOS:000444553900024
出版者OXFORD UNIV PRESS
资助机构National Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [91231104, 31470331, 31222006] ; 100 Talents Program of the Chinese Academy of SciencesChinese Academy of Sciences ; European CommissionEuropean CommissionEuropean Commission Joint Research Centre [H2020-ERC-2014-CoG-647900] ; Spanish Ministry of Science, Innovation, and Universities [BFU2014-57779-P, BFU2017-82937-P]
源URL[http://ir.ibcas.ac.cn/handle/2S10CLM1/20625]  
专题植物研究所_系统与进化植物学研究中心_系统与进化植物学研究中心_学位论文
作者单位1.Univ Chinese Acad Sci, Coll Life Sci, Beijing, Peoples R China
2.Univ Pompeu Fabra, CSIC, Inst Evolutionary Biol, Barcelona, Spain
3.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing, Peoples R China
推荐引用方式
GB/T 7714		 Li, Zi-Wen,Hou, Xing-Hui,Chen, Jia-Fu,et al. Transposable Elements Contribute to the Adaptation of Arabidopsis thaliana[J]. GENOME BIOLOGY AND EVOLUTION,2018,10(8):2140-2150.
APA Li, Zi-Wen.,Hou, Xing-Hui.,Chen, Jia-Fu.,Xu, Yong-Chao.,Wu, Qiong.,...&Guo, Ya-Long.(2018).Transposable Elements Contribute to the Adaptation of Arabidopsis thaliana.GENOME BIOLOGY AND EVOLUTION,10(8),2140-2150.
MLA Li, Zi-Wen,et al."Transposable Elements Contribute to the Adaptation of Arabidopsis thaliana".GENOME BIOLOGY AND EVOLUTION 10.8(2018):2140-2150.

入库方式： OAI收割

来源：植物研究所

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