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The complete chloroplast genome sequence ofMalus toringo(Rosaceae)

文献类型：期刊论文

作者Li, Yanan2; Liu, Yanlei2,3; Xu, Chao2; Li, Fengyi; Wang, Ling; Zhou, Shiliang2,3
刊名MITOCHONDRIAL DNA PART B-RESOURCES
出版日期2020
卷号5期号:3页码:2832-2833
关键词Malus toringo complete chloroplast genome medicinal value phylogenetic relationships
DOI10.1080/23802359.2020.1790317
文献子类Article
英文摘要Malus toringo(Siebold) Siebold ex de Vriese is a worthy species in the genus Malus (family Rosaceae) distributing from North America and Asia, especially in China. In addition to its ornamental value, the medicinal value of its fruits has also been developed to treat food stagnation diseases. Herein, we obtained the complete chloroplast genome ofM. toringousing next-generation sequencing technology. The complete chloroplast genome is 160,039 base pair (bp) in length, including a large single copy (LSC) region of 88,142 bp, a small single copy (SSC) region of 19,183 bp, and a pair of inverted repeat regions (IRs, 26,357 bp). And, the overall GC content of the chloroplast genome was 36.6%. Besides, a total of 128 unique genes were found in the chloroplast genome, namely 83 protein-coding genes (PCGs), 37 tRNA genes (tRNA), and eight rRNA genes (rRNA). A maximum-likelihood phylogenetic tree was reconstructed using the full length of chloroplast genome to show the phylogenetic relationships among species in genus Malus. It was concluded thatM. toringowas phylogenetically close toM. angustifolia.
学科主题Genetics & Heredity
出版地ABINGDON
电子版国际标准刊号2380-2359
WOS关键词ALGORITHM
WOS研究方向Genetics & Heredity
语种英语
WOS记录号WOS:000553699100001
出版者TAYLOR & FRANCIS LTD
资助机构National Nature Fund Project [31670344] ; Strategic Priority Research Program of the Chinese Academy of SciencesChinese Academy of Sciences [XDA 23080204] ; National Fund Project [31872679]
源URL[http://ir.ibcas.ac.cn/handle/2S10CLM1/21652]  
专题植物研究所_系统与进化植物学研究中心_系统与进化植物学研究中心_学位论文
作者单位1.Univ Chinese Acad Sci, Coll Life Sci, Beijing 100049, Peoples R China
2.Northeast Forestry Univ, Coll Landscape Architecture, Harbin 150040, Peoples R China
3.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing 100093, Peoples R China
推荐引用方式
GB/T 7714		 Li, Yanan,Liu, Yanlei,Xu, Chao,et al. The complete chloroplast genome sequence ofMalus toringo(Rosaceae)[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2020,5(3):2832-2833.
APA Li, Yanan,Liu, Yanlei,Xu, Chao,Li, Fengyi,Wang, Ling,&Zhou, Shiliang.(2020).The complete chloroplast genome sequence ofMalus toringo(Rosaceae).MITOCHONDRIAL DNA PART B-RESOURCES,5(3),2832-2833.
MLA Li, Yanan,et al."The complete chloroplast genome sequence ofMalus toringo(Rosaceae)".MITOCHONDRIAL DNA PART B-RESOURCES 5.3(2020):2832-2833.

入库方式： OAI收割

来源：植物研究所

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