Evolutionary strategies drive a balance of the interacting gene products for the CBL and CIPK gene families
文献类型：期刊论文
| 作者 | Zhang, Xiaoxia2; Li, Xiaoxia2; Zhao, Ran; Zhou, Yun3; Jiao, Yuannian2
|
| 刊名 | NEW PHYTOLOGIST
 |
| 出版日期 | 2020 |
| 卷号 | 226期号:5页码:1506-1516 |
| 关键词 | calcineurin B-like (CBL) CBL-interacting protein kinase (CIPK) gene balance hypothesis (GBH) gene retention whole-genome duplication (WGD) |
| ISSN号 | 0028-646X |
| DOI | 10.1111/nph.16445 |
| 文献子类 | Article |
| 英文摘要 | Genes encoding interacting proteins tend to be co-retained after whole-genome duplication (WGD). The preferential retention after WGD has been explained by the gene balance hypothesis (GBH). However, small-scale duplications could independently occur in the connected gene families. Certain evolutionary strategies might keep the dosage balanced. Here, we examined the gene duplication, interaction and expression patterns of calcineurin B-like (CBL) and CBL-interacting protein kinase (CIPK) gene families to understand the underlying principles. The ratio of the CBL and CIPK gene numbers evolved from 5 : 7 in Physcomitrella to 10 : 26 in Arabidopsis, and retrotransposition, tandem duplication, and WGDs contributed to the expansion. Two pairs of CBLs and six pairs of CIPKs were retained after the alpha WGD in Arabidopsis, in which specific interaction patterns were identified. In some cases, two retained CBLs (CIPKs) might compete to interact with a sole CIPK (CBL). Results of gene expression analyses indicated that the relatively over-retained duplicates tend to show asymmetric expression, thus avoiding competition. In conclusion, our results suggested that the highly specific interaction, together with the differential gene expression pattern, jointly maintained the balanced dosage for the interacting CBL and CIPK proteins. |
| 学科主题 | Plant Sciences |
| 出版地 | HOBOKEN |
| 电子版国际标准刊号 | 1469-8137 |
| WOS关键词 | WHOLE-GENOME DUPLICATION ; CALCIUM SENSOR ; PHYLOGENETIC ANALYSIS ; SIGNALING NETWORK ; PROTEIN-KINASES ; DOSAGE SENSITIVITY ; ABIOTIC STRESS ; SALT TOLERANCE ; ARABIDOPSIS ; POLYPLOIDY |
| WOS研究方向 | Plant Sciences |
| 语种 | 英语 |
| WOS记录号 | WOS:000529559600025 |
| 出版者 | WILEY |
| 源URL | [http://ir.ibcas.ac.cn/handle/2S10CLM1/21782]  |
| 专题 | 植物研究所_系统与进化植物学研究中心_系统与进化植物学研究中心_学位论文 |
| 作者单位 | 1.Henan Univ, Sch Life Sci, Key Lab Plant Stress Biol, Kaifeng 475001, Peoples R China 2.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing, Peoples R China 3.Univ Chinese Acad Sci, Beijing 100049, Peoples R China |
| 推荐引用方式 GB/T 7714 | Zhang, Xiaoxia,Li, Xiaoxia,Zhao, Ran,et al. Evolutionary strategies drive a balance of the interacting gene products for the CBL and CIPK gene families[J]. NEW PHYTOLOGIST,2020,226(5):1506-1516. |
| APA | Zhang, Xiaoxia,Li, Xiaoxia,Zhao, Ran,Zhou, Yun,&Jiao, Yuannian.(2020).Evolutionary strategies drive a balance of the interacting gene products for the CBL and CIPK gene families.NEW PHYTOLOGIST,226(5),1506-1516. |
| MLA | Zhang, Xiaoxia,et al."Evolutionary strategies drive a balance of the interacting gene products for the CBL and CIPK gene families".NEW PHYTOLOGIST 226.5(2020):1506-1516. |
入库方式： OAI收割
来源：植物研究所
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