The Compositae Tree of Life in the age of phylogenomics
文献类型：期刊论文
| 作者 | Mandel, Jennifer R.; Barker, Michael S.; Bayer, Randall J.; Dikow, Rebecca B.; Gao, Tian-Gang; Jones, Katy E.; Keeley, Sterling7; Kilian, Norbert6; Ma, Hong8,9,10; Siniscalchi, Carolina M. |
| 刊名 | JOURNAL OF SYSTEMATICS AND EVOLUTION
 |
| 出版日期 | 2017 |
| 卷号 | 55期号:4页码:405-410 |
| 关键词 | chloroplast gene-tree genomes Hyb-Seq next-generation sequencing nuclear phylogenetics sequence capture transcriptome |
| ISSN号 | 1674-4918 |
| DOI | 10.1002/joc.4814 |
| 文献子类 | Article; Proceedings Paper |
| 英文摘要 | Comprising more than 25000 species, the Sunflower Family (Compositae or Asteraceae) is the largest family of flowering plants. Many of its lineages have experienced recent and rapid radiations, and the family has a deep and widespread history of large-scale gene duplications and polyploidy. Many of the most important evolutionary questions about the family's diversity remain unanswered due to poor resolution and lack of support for major nodes of the phylogeny. Our group has employed a phylogenomics approach using Hyb-Seq that includes sequencing approximate to 1000 low-copy number nuclear markers, plus partial plastomes for large numbers of species. Here we discuss our progress to date and present two phylogenies comprising nine subfamilies and 25 tribes using concatenated and coalescence-based analyses. We discuss future plans for incorporating high-quality reference genomes and transcriptomes to advance systematic and evolutionary studies in the Compositae. While we have made great strides toward developing tools for employing phylogenomics and resolving relationships within Compositae, much work remains. Recently formed global partnerships will work to solve the unanswered evolutionary questions for this megafamily. |
| 学科主题 | Meteorology & Atmospheric Sciences |
| 出版地 | HOBOKEN |
| 电子版国际标准刊号 | 1759-6831 |
| WOS关键词 | PHYLOGENETIC ANALYSIS ; ASTERACEAE ; EVOLUTION ; VERNONIEAE ; GENOMICS ; SUPPORT |
| 语种 | 英语 |
| WOS记录号 | WOS:000397497700011 |
| 出版者 | WILEY |
| 资助机构 | Undersecretary for Science, Smithsonian Institution ; W. Harry Feinstone Center for Genomic Research, University of Memphis ; FAPESP scholarshipFundacao de Amparo a Pesquisa do Estado de Sao Paulo (FAPESP) [2016/12446-1] |
| 源URL | [http://ir.ibcas.ac.cn/handle/2S10CLM1/22152]  |
| 专题 | 植物研究所_系统与进化植物学研究中心_系统与进化植物学研究中心_学位论文 |
| 作者单位 | 1.Dikow, Rebecca B.] Smithsonian Inst, Natl Zool Pk, Ctr Conservat & Evolutionary Genet, Smithsonian Inst Biodivers Genom, Washington, DC 20013 USA 2.Univ Memphis, Dept Biol Sci, Memphis, TN 38152 USA 3.Mandel, Jennifer R.] Univ Memphis, W Harry Feinstone Ctr Genom Res, Memphis, TN 38152 USA 4.Barker, Michael S.] Univ Arizona, Dept Ecol & Evolutionary Biol, Tucson, AZ 85721 USA 5.Dikow, Rebecca B.] Smithsonian Inst, Natl Museum Nat Hist, Div Mammals, Washington, DC 20013 USA 6.Chinese Acad Sci, State Key Lab Systemat & Evolutionary Bot, Inst Bot, Beijing 10093, Peoples R China 7.Free Univ Berlin, Bot Garten & Bot Museum Berlin Dahlem, Konigin Luise Str 6-8, D-14195 Berlin, Germany 8.Univ Hawaii, Dept Bot, Honolulu, HI 96822 USA 9.Penn State Univ, Dept Biol, University Pk, PA 16802 USA 10.Penn State Univ, Huck Inst Life Sci, University Pk, PA 16802 USA |
| 推荐引用方式 GB/T 7714 | Mandel, Jennifer R.,Barker, Michael S.,Bayer, Randall J.,et al. The Compositae Tree of Life in the age of phylogenomics[J]. JOURNAL OF SYSTEMATICS AND EVOLUTION,2017,55(4):405-410. |
| APA | Mandel, Jennifer R..,Barker, Michael S..,Bayer, Randall J..,Dikow, Rebecca B..,Gao, Tian-Gang.,...&Funk, Vicki A..(2017).The Compositae Tree of Life in the age of phylogenomics.JOURNAL OF SYSTEMATICS AND EVOLUTION,55(4),405-410. |
| MLA | Mandel, Jennifer R.,et al."The Compositae Tree of Life in the age of phylogenomics".JOURNAL OF SYSTEMATICS AND EVOLUTION 55.4(2017):405-410. |
入库方式： OAI收割
来源：植物研究所
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