Plastid phylogenomic study of grape species and its implications for evolutionary study and conservation of Vitis
文献类型：期刊论文
| 作者 | Mu, Xian-Yun; Shen, Xue-Li; Wu, Yuan-Mi; Zhu, Yi-Xuan; Dong, Shu-Bin; Xia, Xiao-Fei; Lin, Qin-Wen; Fan, Pei-Ge; Liu, Yu-Lin; Zhang, Zhi-Xiang |
| 刊名 | PHYTOTAXA
 |
| 出版日期 | 2018 |
| 卷号 | 364期号:1页码:71-80 |
| 关键词 | Vitis phylogenomic complete chloroplast genome Vitis baihuashanensis endangered species China |
| ISSN号 | 1179-3155 |
| DOI | 10.11646/phytotaxa.364.1.4 |
| 文献子类 | Article |
| 英文摘要 | Because of rapid diversification and frequent interspecific gene flow within the genus and inappropriate molecular markers used for phylogenetic studies, phylogeny and evolution of the economically significant crop genus Vitis are poorly resolved and understood, and species delimitation of Vitis remain disputable. In order to better understand of relationships within Vitis, phylogenomic analysis of chloroplast genomes were performed based on extensive sampling scheme. Well resolved phylogenetic tree and clear divergence pattern of Vitis were obtained in the present study. The results shows that subg. Vitis was constituted by three strongly supported monophyletic clades whose species are distributed in North America, Europe and Asia, respectively. Nine molecular markers arc provided as potential markers for DNA barcoding and phylogenetic study of Vitis. Furthermore, taxonomic position of the critically endangered species endemic to Northern China, V baihuashanensis, is investigated and suggested to be a separate species based on phylogenomic analysis and morphological comparisons, and effective conservation actions is badly needed. Molecular resources reported in this study could also be used for genetic engineering studies of Vitis, and will potentially promote genomic exploration of crop wild relatives and conservation of the germplasm. |
| 学科主题 | Plant Sciences |
| 出版地 | AUCKLAND |
| 电子版国际标准刊号 | 1179-3163 |
| WOS关键词 | NONCODING CHLOROPLAST DNA ; GENOME SEQUENCE ; GENUS VITIS ; TORTOISE ; HARE ; ALGORITHM ; REGIONS |
| 语种 | 英语 |
| WOS记录号 | WOS:000441000700004 |
| 出版者 | MAGNOLIA PRESS |
| 资助机构 | Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [31400193] ; Beijing Natural Science FoundationBeijing Natural Science Foundation [5174031] ; Beijing Excellent Talent Project [2016400685627G234] ; [201710022070] |
| 源URL | [http://ir.ibcas.ac.cn/handle/2S10CLM1/20460]  |
| 专题 | 中科院北方资源植物重点实验室 |
| 作者单位 | 1.Northwest A&F Univ, Coll Forestry, Yangling 712100, Shaanxi, Peoples R China 2.Chinese Acad Sci, Inst Bot, Beijing 100093, Peoples R China 3.[Lin, Qin-Wen 4.[Mu, Xian-Yun 5.Shen, Xue-Li 6.Wu, Yuan-Mi 7.Zhu, Yi-Xuan 8.Beijing Forestry Univ, Coll Nat Conservat, Lab Systemat Evolut & Biogeog Woody Plants, Beijing 100083, Peoples R China 9.Beijing Forestry Univ, Coll Biol Sci & Biotechnol, Beijing 100083, Peoples R China 10.Beijing Museum Nat Hist, Beijing 100050, Peoples R China |
| 推荐引用方式 GB/T 7714 | Mu, Xian-Yun,Shen, Xue-Li,Wu, Yuan-Mi,et al. Plastid phylogenomic study of grape species and its implications for evolutionary study and conservation of Vitis[J]. PHYTOTAXA,2018,364(1):71-80. |
| APA | Mu, Xian-Yun.,Shen, Xue-Li.,Wu, Yuan-Mi.,Zhu, Yi-Xuan.,Dong, Shu-Bin.,...&Zhang, Zhi-Xiang.(2018).Plastid phylogenomic study of grape species and its implications for evolutionary study and conservation of Vitis.PHYTOTAXA,364(1),71-80. |
| MLA | Mu, Xian-Yun,et al."Plastid phylogenomic study of grape species and its implications for evolutionary study and conservation of Vitis".PHYTOTAXA 364.1(2018):71-80. |
入库方式： OAI收割
来源：植物研究所
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