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Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022

文献类型：期刊论文

作者Xue, Yongbiao1,2,3,4; Bao, Yiming1,2,3,4; Zhang Zhang1,2,3,4; Zhao, Wenming1,2,3,4; Xiao, Jingfa1,2,3,4; He, Shun-min4,5,6; Zhang, Guoqing4,7,8; Li, Yixue4,7,8; Guoping, Zhao4,7,8,9,10; Chen, Runsheng5,6,11
刊名NUCLEIC ACIDS RESEARCH
出版日期2022-01-07
卷号50期号:D1页码:D27-D38
ISSN号0305-1048
DOI10.1093/nar/gkab951
英文摘要The National Genomics Data Center (NGDC), part of the China National Center for Bioinformation (CNCB), provides a family of database resources to support global research in both academia and industry. With the explosively accumulated multi-omics data at ever-faster rates, CNCB-NGDC is constantly scaling up and updating its core database resources through big data archive, curation, integration and analysis. In the past year, efforts have been made to synthesize the growing data and knowledge, particularly in single-cell omics and precision medicine research, and a series of resources have been newly developed, updated and enhanced. Moreover, CNCB-NGDC has continued to daily update SARS-CoV-2 genome sequences, variants, haplotypes and literature. Particularly, OpenLB, an open library of bioscience, has been established by providing easy and open access to a substantial number of abstract texts from PubMed, bioRxiv and medRxiv. In addition, Database Commons is significantly updated by cataloguing a full list of global databases, and BLAST tools are newly deployed to provide online sequence search services.
资助项目Strategic Priority Research Program of the Chinese Academy of Sciences[XDB38030200] ; Strategic Priority Research Program of the Chinese Academy of Sciences[XDB38050300] ; Strategic Priority Research Program of the Chinese Academy of Sciences[XDB38030400] ; Strategic Priority Research Program of the Chinese Academy of Sciences[XDA19050302] ; Strategic Priority Research Program of the Chinese Academy of Sciences[XDA19090116] ; Strategic Priority Research Program of the Chinese Academy of Sciences[XDA24040201] ; Strategic Priority Research Program of the Chinese Academy of Sciences[XDB38030100] ; Strategic Priority Research Program of the Chinese Academy of Sciences[XDA12030100] ; Strategic Priority Research Program of the Chinese Academy of Sciences[XDB38040300] ; National Key Research and Development Program of China[2019YFA0801801] ; National Key Research and Development Program of China[2018YFA0801405] ; National Key Research and Development Program of China[2018YFD1000505] ; National Key Research and Development Program of China[2018YFC2000100] ; National Key Research and Development Program of China[2018YFC1406902] ; National Key Research and Development Program of China[2018YFC0910400] ; National Key Research and Development Program of China[2018YFC0310602] ; National Key Research and Development Program of China[2018YFA0903700] ; National Key Research and Development Program of China[2018YFA0900704] ; National Key Research and Development Program of China[2017YFC1201200] ; National Natural Science Foundation of China[91731303] ; National Natural Science Foundation of China[81670462] ; National Natural Science Foundation of China[31970565] ; National Natural Science Foundation of China[31871328] ; National Natural Science Foundation of China[31871294] ; National Natural Science Foundation of China[31701117] ; National Natural Science Foundation of China[31970647] ; National Natural Science Foundation of China[21621004] ; National Natural Science Foundation of China[31801104] ; National Natural Science Foundation of China[31771465] ; National Natural Science Foundation of China[31771410] ; National Natural Science Foundation of China[31771388] ; National Natural Science Foundation of China[31671360] ; National Natural Science Foundation of China[81701567] ; National Natural Science Foundation of China[31571358] ; National Natural Science Foundation of China[31525014] ; National Natural Science Foundation of China[1470330] ; National Natural Science Foundation of China[31961130380] ; National Natural Science Foundation of China[31711530221] ; National Natural Science Foundation of China[31771477] ; National Natural Science Foundation of China[31571366] ; International Partnership Program of the Chinese Academy of Sciences[153F11KYSB20160008] ; International Partnership Program of the Chinese Academy of Sciences[153D31KYSB20170121] ; 13th Five-year Informatization Plan of Chinese Academy of Sciences[XXH13505-05] ; Genomics Data Center Construction of Chinese Academy of Sciences[WX145XQ07-04] ; Fundamental Research Funds for the Central Universities[2019kfyRCPY043] ; UK Royal Society-Newton Advanced Fellowship[NAF\R1\191094] ; Key Program of the Chinese Academy of Sciences[KJZD-EW-L14] ; Key Research Program of Frontier Sciences of the Chinese Academy of Sciences[QYZDJ-SSW-SYS009] ; Key Technology Talent Program of the Chinese Academy of Sciences ; 100 Talent Program of the Chinese Academy of Sciences ; K.C. Wong Education Foundation ; Youth Innovation Promotion Association of the Chinese Academy of Sciences[2019104] ; Youth Innovation Promotion Association of the Chinese Academy of Sciences[2018134] ; Youth Innovation Promotion Association of the Chinese Academy of Sciences[2017141] ; National Key RD Program[SQ2017YFSF090210] ; China Postdoctoral Science Foundation[2019M652623] ; China Postdoctoral Science Foundation[2018M632830] ; China 863 Program[2015AA020108] ; Open Biodiversity and Health Big Data Program of IUBS ; Professional Association of the Alliance of International Science Organizations[ANSO-PA-2020-07] ; Funds for Basic Resources Investigation Research of theMinistry of Science and Technology[2018FY10080002] ; Special Project on National Science and Technology Basic Resources Investigation[2019FY100102] ; CAS Pioneer 100-Talent program ; Key Research Program of the Chinese Academy of Sciences[KFZD-SW-219-5] ; Zhang jiang special project of national innovation demonstration zone[ZJ2018-ZD-013] ; Science and Technology Service Network Initiative of Chinese Academy of Sciences ; Hunan Provincial Science and Technology Program[2018wk4001] ; 111 Project[B18059] ; King Abdullah University of Science and Technology (KAUST)[FCC/1/1976-18-01] ; King Abdullah University of Science and Technology (KAUST)[FCC/1/1976-23-01] ; King Abdullah University of Science and Technology (KAUST)[FCC/1/1976-25-01] ; King Abdullah University of Science and Technology (KAUST)[FCC/1/1976-26-01] ; King Abdullah University of Science and Technology (KAUST)[REI/1/0018-0101] ; King Abdullah University of Science and Technology (KAUST)[REI/1/4216-01-01] ; King Abdullah University of Science and Technology (KAUST)[REI/1/4437-01-01] ; King Abdullah University of Science and Technology (KAUST)[REI/1/447301-01] ; King Abdullah University of Science and Technology (KAUST)[URF/1/4352-01-01] ; King Abdullah University of Science and Technology (KAUST)[URF/1/4379-01-01] ; King Abdullah University of Science and Technology (KAUST)[REI/1/4742-01-01] ; King Abdullah University of Science and Technology (KAUST)[URF/1/4098-01-01] ; Chinese Academy of Sciences[KFJ-BRP-017-79] ; The National Key Research and Development Program of China[2017YFC0908403] ; The National Key Research and Development Program of China[2017YFC0907505] ; The National Key Research and Development Program of China[2017YFC0907503] ; The National Key Research and Development Program of China[2017YFC0907502] ; The National Key Research and Development Program of China[2016YFE0206600] ; The National Key Research and Development Program of China[2016YFC0906403] ; The National Key Research and Development Program of China[2016YFC0903003] ; The National Key Research and Development Program of China[2016YFC0901904] ; The National Natural Science Foundation of China[31822030] ; The National Natural Science Foundation of China[31801113] ; The National Natural Science Foundation of China[31801154] ; The National Natural Science Foundation of China[31771458] ; The National Natural Science Foundation of China[91940303] ; The National Natural Science Foundation of China[91940306] ; The National Natural Science Foundation of China[31661143031] ; The National Natural Science Foundation of China[31730110] ; The National Natural Science Foundation of China[31871281] ; The National Natural Science Foundation of China[31970634] ; The National Natural Science Foundation of China[31930021] ; The National Natural Science Foundation of China[32025009] ; The National Natural Science Foundation of China[31970633] ; The National Natural Science Foundation of China[32100520] ; The National Natural Science Foundation of China[62002388] ; The National Natural Science Foundation of China[61772557] ; The National Natural Science Foundation of China[81761168038] ; The National Natural Science Foundation of China[82161148009] ; theNational Key Research and Development Program of China[2016YFC0901903] ; theNational Key Research and Development Program of China[2016YFC0901702] ; theNational Key Research and Development Program of China[2016YFC0901604] ; theNational Key Research and Development Program of China[2017YFC0908405] ; theNational Key Research and Development Program of China[2017YFC0908404] ; theNational Key Research and Development Program of China[2016YFC0901603] ; theNational Key Research and Development Program of China[2016YFB0201702] ; theNational Key Research and Development Program of China[2016YFA0501704] ; theNational Key Research and Development Program of China[2021YFC0863300] ; theNational Key Research and Development Program of China[2016YFC0902500] ; theNational Key Research and Development Program of China[2018YFA0900700]
WOS研究方向Biochemistry & Molecular Biology
语种英语
出版者OXFORD UNIV PRESS
WOS记录号WOS:000743496700004
源URL[http://ir.amss.ac.cn/handle/2S8OKBNM/59929]  
专题应用数学研究所
通讯作者Zhang Zhang; Zhao, Wenming; Xiao, Jingfa; He, Shun-min
作者单位1.Chinese Acad Sci, Natl Genom Data Ctr, Beijing Inst Genom, Beijing 100101, Peoples R China
2.Chinese Acad Sci, Beijing Inst Genom, CAS Key Lab Genome Sci & Informat, Beijing 100101, Peoples R China
3.China Natl Ctr Bioinformat, Beijing 100101, Peoples R China
4.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
5.Chinese Acad Sci, Ctr Big Data Res Hlth, Natl Genom Data Ctr, Inst Biophys, Beijing 100101, Peoples R China
6.Chinese Acad Sci, Inst Biophys, Ctr Big Data Res Hlth, Key Lab RNA Biol, Beijing 100101, Peoples R China
7.Chinese Acad Sci, Univ Chinese Acad Sci, Natl Genom Data Ctr,Shanghai Inst Nutr & Hlth, Key Lab Computat Biol,CAS MPG Partner Inst Comput, 320 Yueyang Rd, Shanghai 200031, Peoples R China
8.Chinese Acad Sci, Univ Chinese Acad Sci, Shanghai Inst Nutr & Hlth,Biomed Big Data Ctr, Key Lab Computat Biol,CAS MPG Partner Inst Comput, 320 Yueyang Rd, Shanghai 200031, Peoples R China
9.Chinese Acad Sci, CAS Ctr Excellence Mol Plant Sci, Inst Plant Physiol & Ecol, CAS Key Lab Synthet Biol, 300 Fenglin Rd, Shanghai 200032, Peoples R China
10.Chinese Acad Sci, Ctr Quantitat Synthet Biol, Inst Synthet Biol, Shenzhen Inst Adv Tech Nol, Shenzhen 518000, Peoples R China
推荐引用方式
GB/T 7714		 Xue, Yongbiao,Bao, Yiming,Zhang Zhang,et al. Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022[J]. NUCLEIC ACIDS RESEARCH,2022,50(D1):D27-D38.
APA Xue, Yongbiao.,Bao, Yiming.,Zhang Zhang.,Zhao, Wenming.,Xiao, Jingfa.,...&Li, Xia.(2022).Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022.NUCLEIC ACIDS RESEARCH,50(D1),D27-D38.
MLA Xue, Yongbiao,et al."Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022".NUCLEIC ACIDS RESEARCH 50.D1(2022):D27-D38.

入库方式： OAI收割

来源：数学与系统科学研究院

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