Complete chloroplast genome sequence of an endangered plant Oreocharis cotinifolia (Gesneriaceae) from Guangxi, China
文献类型：期刊论文
| 作者 | Tang,Jinli; Zhao,Bo; Li,Cailin; Hong,Xin |
| 刊名 | MITOCHONDRIAL DNA PART B-RESOURCES
 |
| 出版日期 | 2021 |
| 卷号 | 6期号:10页码:2936-2938 |
| ISSN号 | 2380-2359 |
| 关键词 | Chloroplast genome Endangered Oreocharis cotinifolia (Gesneriaceae) Phylogeny |
| DOI | 10.1080/23802359.2021.1973918 |
| 英文摘要 | Oreocharis cotinifolia is a plant herb with a small population and narrow distribution range in southeast China. It is listed as one of the class 1 key protected wild plants in China and designated as a critically endangered species. In this study, we assembled the complete chloroplast genome of O. cotinifolia using data from high-throughput Illumina sequencing. The cp genome is 153,577 bp in length and includes two inverted repeats (IRs) of 25,292 bp, separated by a large single-copy region (LSC) and a small single-copy region (SSC) that are 84,898 bp and 18,095 bp, respectively. The GC content is 37.42%. The genome encodes 128 functional genes, including 87 protein-coding, 37 tRNA, and 4 rRNA genes. Maximum likelihood analysis showed that O. cotinifolia is closely related to the congeneric O. mileensis. The complete chloroplast genome will contribute to further studies on phylogeny and conservation of O. cotinifolia and related taxa in Oreocharis of Gesneriaceae. |
| WOS记录号 | WOS:000696218200001 |
| 源URL | [http://ir.kib.ac.cn/handle/151853/73644]  |
| 专题 | 中国科学院昆明植物研究所 |
| 作者单位 | 1.Anhui Univ, Sch Resources & Environm Engn, Anhui Prov Engn Lab Wetland Ecosyst Protect & Res, Hefei, Anhui, Peoples R China 2.Guilin Med Univ, Coll Pharm, Guilin, Peoples R China 3.Chinese Acad Sci, Kunming Inst Bot, Yunnan Key Lab Integrat Conservat Plant Species E, Kunming, Yunnan, Peoples R China 4.Guilin Tourism Univ, Sch Leisure & Hlth, Guilin, Peoples R China 5.Guangxi Zhuang Autonomous Reg & Chinese Acad Sci, Gesneriad Conservat Ctr China GCCC, Natl Gesneriaceae Germplasm Resources Bank GXIB, Gesneriad Comm China Wild Plant Conservat Assoc, Guilin, Peoples R China |
| 推荐引用方式 GB/T 7714 | Tang,Jinli,Zhao,Bo,Li,Cailin,et al. Complete chloroplast genome sequence of an endangered plant Oreocharis cotinifolia (Gesneriaceae) from Guangxi, China[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2021,6(10):2936-2938. |
| APA | Tang,Jinli,Zhao,Bo,Li,Cailin,&Hong,Xin.(2021).Complete chloroplast genome sequence of an endangered plant Oreocharis cotinifolia (Gesneriaceae) from Guangxi, China.MITOCHONDRIAL DNA PART B-RESOURCES,6(10),2936-2938. |
| MLA | Tang,Jinli,et al."Complete chloroplast genome sequence of an endangered plant Oreocharis cotinifolia (Gesneriaceae) from Guangxi, China".MITOCHONDRIAL DNA PART B-RESOURCES 6.10(2021):2936-2938. |
入库方式： OAI收割
来源：昆明植物研究所
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