Chromosome-Scale Genome Assembly of the Resurrection Plant Acanthochlamys bracteata (Velloziaceae)
文献类型：期刊论文
| 作者 | Gao, Zhi-Yuan; Li, Zhang-Hai; Lin, Dong-Liang; Jin, Xiao-Hua
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| 刊名 | GENOME BIOLOGY AND EVOLUTION
 |
| 出版日期 | 2021 |
| 卷号 | 13期号:8 |
| 关键词 | resurrection plant Acanthochlamys bracteata cold tolerance |
| ISSN号 | 1759-6653 |
| DOI | 10.1093/gbe/evab147 |
| 文献子类 | Article |
| 英文摘要 | Acanthochlamys bracteata (Velloziaceae) is a resurrection plant with cold tolerance. Herein, a chromosome-level reference genome of A. bracteata based onNanopore, Illumina, and Hi-Cdata is reported. The high-quality assembled genomewas 197.97Mb, with a scaffold N50 value of 8.64Mb and a contig N50 value of 6.96Mb. We annotated 23,509 protein-coding genes. Eight contracted gene families and three expanded gene families were detected. Repeat sequences accounted for approximately 28.63% of the genome. The LEA1 and Dehydrin gene families, which are involved in desiccation resistance, expanded inA. bracteata. We identified genes involved in chilling tolerance, COLD1. |
| 学科主题 | Evolutionary Biology ; Genetics & Heredity |
| 出版地 | OXFORD |
| WOS关键词 | MULTIPLE SEQUENCE ALIGNMENT ; PHYLOGENETIC ANALYSIS ; WEB SERVER ; ANNOTATION ; TOLERANCE ; DATABASE ; CLASSIFICATION ; IDENTIFICATION ; PROGRAM ; FORMAT |
| WOS研究方向 | Science Citation Index Expanded (SCI-EXPANDED) |
| 语种 | 英语 |
| WOS记录号 | WOS:000690274300016 |
| 出版者 | OXFORD UNIV PRESS |
| 资助机构 | Strategic Priority Research Program of the Chinese Academy of Sciences [XDA19050201] ; National Natural Science Foundation of China [31870195, 31670194] |
| 源URL | [http://ir.ibcas.ac.cn/handle/2S10CLM1/26728]  |
| 专题 | 植物研究所_系统与进化植物学研究中心_系统与进化植物学研究中心_学位论文 |
| 作者单位 | 1.[Gao, Zhi-Yuan 2.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing, Peoples R China 3.Univ Marburg, Inst Pharmaceut Biol & Biotechnol, Marburg, Germany 4.Univ Chinese Acad Sci, Beijing, Peoples R China 5.Lin, Dong-Liang |
| 推荐引用方式 GB/T 7714 | Gao, Zhi-Yuan,Li, Zhang-Hai,Lin, Dong-Liang,et al. Chromosome-Scale Genome Assembly of the Resurrection Plant Acanthochlamys bracteata (Velloziaceae)[J]. GENOME BIOLOGY AND EVOLUTION,2021,13(8). |
| APA | Gao, Zhi-Yuan,Li, Zhang-Hai,Lin, Dong-Liang,&Jin, Xiao-Hua.(2021).Chromosome-Scale Genome Assembly of the Resurrection Plant Acanthochlamys bracteata (Velloziaceae).GENOME BIOLOGY AND EVOLUTION,13(8). |
| MLA | Gao, Zhi-Yuan,et al."Chromosome-Scale Genome Assembly of the Resurrection Plant Acanthochlamys bracteata (Velloziaceae)".GENOME BIOLOGY AND EVOLUTION 13.8(2021). |
入库方式： OAI收割
来源：植物研究所
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