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Mining plant metabolomes: Methods applications, and perspectives

文献类型：期刊论文

作者Ma, Aimin1; Qi, Xiaoquan1
刊名PLANT COMMUNICATIONS
出版日期2021
卷号2期号:5
关键词plant metabolomics metabolites data-processing methods application
ISSN号2590-3462
DOI10.1016/j.xplc.2021.100238
文献子类Review
英文摘要Plants produce a variety of metabolites that are essential for plant growth and human health. To fully understand the diversity of metabolites in certain plants, lots of methods have been developed for metabolites detection and data processing. In the data-processing procedure, how to effectively reduce false-positive peaks, analyze large-scale metabolic data, and annotate plant metabolites remains challenging. In this review, we introduce and discuss some prominent methods that could be exploited to solve these problems, including a five-step filtering method for reducing false-positive signals in LC-MS analysis, QPMASS for analyzing ultra-large GC-MS data, and MetDNA for annotating metabolites. The main applications of plant metabolomics in species discrimination, metabolic pathway dissection, population genetic studies, and some other aspects are also highlighted. To further promote the development of plant metabolomics, more effective and integrated methods/platforms for metabolite detection and comprehensive databases for metabolite identification are highly needed. With the improvement of these technologies and the development of genomics and transcriptomics, plant metabolomics will be widely used in many fields.
学科主题Biochemistry & Molecular Biology ; Plant Sciences
出版地AMSTERDAM
WOS关键词MASS-SPECTROMETRY DATA ; GENOME-WIDE ASSOCIATION ; GC/TOF-MS DATA ; GAS-CHROMATOGRAPHY ; NATURAL-PRODUCTS ; DIFFERENT TISSUES ; GENETIC-ANALYSIS ; PEAK DETECTION ; IDENTIFICATION ; TOOL
WOS研究方向Science Citation Index Expanded (SCI-EXPANDED)
语种英语
WOS记录号WOS:000696699600003
出版者ELSEVIER
资助机构Strategic Priority Research Program of the Chinese Academy of Sciences [XDB27010202] ; National Natural Science Foundation of China [31920103003] ; National Key Research and Development Program of China [2016YFD0100904]
源URL[http://ir.ibcas.ac.cn/handle/2S10CLM1/26795]  
专题中科院植物分子生理学重点实验室
作者单位1.Chinese Acad Sci, Inst Bot, Key Lab Plant Mol Physiol, Beijing 100093, Peoples R China
2.Chinese Acad Sci, Innovat Acad Seed Design, Beijing 100049, Peoples R China
推荐引用方式
GB/T 7714		 Ma, Aimin,Qi, Xiaoquan. Mining plant metabolomes: Methods applications, and perspectives[J]. PLANT COMMUNICATIONS,2021,2(5).
APA Ma, Aimin,&Qi, Xiaoquan.(2021).Mining plant metabolomes: Methods applications, and perspectives.PLANT COMMUNICATIONS,2(5).
MLA Ma, Aimin,et al."Mining plant metabolomes: Methods applications, and perspectives".PLANT COMMUNICATIONS 2.5(2021).

入库方式： OAI收割

来源：植物研究所

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