Rice and maize are two main crops with different growth habits in Northeast China. To investigate the uptake, translocation, and accumulation of organophosphate esters (OPEs) in those two crops, we measured the OPE concentrations in their agricultural soil-crop systems during different growing seasons. OPE concentrations were higher in paddy (221 ± 62.0 ng/g) than in maize (149 ± 31.6 ng/g) soil, with higher OPE levels in the rhizosphere than in bulk soil for rice, and the opposite in maize. Two-step extractions were used to obtain the labile and stable adsorption components of OPEs. The stable-adsorbed OPEs were activated to be more bioavailable by root exudates as rice grew. OPEs in rice increased linearly with the growing period. The uptake and translocation processes of OPEs by crops were not well-explained by logK_ow alone, indicating other processes such as growth dilution are significant for understanding OPE levels in plant. The translocation factors of OPEs from nutritive to reproductive organs indicated that OPEs in rice seeds may follow the translocation from root to leaf and then transfer to grains. Two genera, Sphingomonas and Geobacter, associated with degradation of organophosphorus compounds were enriched in rhizosphere soils, indicating enhanced OPE degradation.