Evolution of plant Ash1 SET genes: structural divergence and functional differentiation
文献类型：期刊论文
| 作者 | Zhu, Xinyu2; Wang, Baohua; Kan, Xianzhao3; Chen, Caoyi; Yu, Chunmei |
| 刊名 | GENES & GENOMICS
 |
| 出版日期 | 2013 |
| 卷号 | 35期号:4页码:463-473 |
| 关键词 | Ash1 SET genes Evolution Functional differentiation Land plants Structural divergence |
| ISSN号 | 1976-9571 |
| DOI | 10.1007/s13258-013-0056-x |
| 文献子类 | Article |
| 英文摘要 | Plant Ash1 SET proteins are involved in H3K36 methylation, and play a key role in plant reproductive development. Genes encoding Ash1 SET proteins constitute a multigene family in which the copy number varies among plant species and functional divergence appears to have occurred repeatedly. To investigate the evolutionary history and functional differentiation of the Ash1 SET gene family, we made a comprehensive evolutionary analysis of this gene family from eleven major representatives of green plants. A novel deep sister relationship grouping previously resolved II-1 and II-2 orthologous groups was identified. The absence of AWS domain in the group II-2 suggests that the independent losses of AWS domain have occurred during evolution. A diversity of gene structures in plant Ash1 SET gene family have been presented since the divergence of Physcomitrella patens (moss) from the other land plants. A small proportion of codons in SET domain regions were detected to be under positive selection along the branches ancestral to land plant and angiosperms, which may have allowed changes of substrate specificity among different evolutionary groups while maintaining the primary function of SET domains. Our predictive subcellular localization and comparative anatomical meta-expression analyses can assort with the structural divergences of Ash1 SET proteins. |
| 学科主题 | Biochemistry & Molecular Biology ; Biotechnology & Applied Microbiology ; Genetics & Heredity |
| 出版地 | NEW YORK |
| 电子版国际标准刊号 | 2092-9293 |
| WOS关键词 | DETECTING POSITIVE SELECTION ; HISTONE METHYLTRANSFERASE ; N-METHYLTRANSFERASES ; DOMAIN PROTEINS ; GENOME REVEALS ; ARABIDOPSIS ; SEQUENCE ; FAMILY ; DIVERSIFICATION ; TRANSCRIPTION |
| WOS研究方向 | Science Citation Index Expanded (SCI-EXPANDED) |
| 语种 | 英语 |
| WOS记录号 | WOS:000322725200006 |
| 出版者 | SPRINGER |
| 资助机构 | State Key Laboratory of Systematic and Evolutionary Botany ; Natural Science Fund for Colleges and Universities in Jiangsu Province ; National Natural Science Foundation of China(National Natural Science Foundation of China (NSFC)) ; Construction Plan for Science and Technology Platform of Nantong City |
| 源URL | [http://ir.ibcas.ac.cn/handle/2S10CLM1/27997]  |
| 专题 | 植物研究所_系统与进化植物学研究中心_系统与进化植物学研究中心_学位论文 |
| 作者单位 | 1.Anhui Normal Univ, Prov Key Lab Conservat & Exploitat Res Biol Resou, Coll Life Sci, Wuhu 241000, Peoples R China 2.Nantong Univ, Sch Life Sci, Nantong 226019, Peoples R China 3.Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing 100093, Peoples R China |
| 推荐引用方式 GB/T 7714 | Zhu, Xinyu,Wang, Baohua,Kan, Xianzhao,et al. Evolution of plant Ash1 SET genes: structural divergence and functional differentiation[J]. GENES & GENOMICS,2013,35(4):463-473. |
| APA | Zhu, Xinyu,Wang, Baohua,Kan, Xianzhao,Chen, Caoyi,&Yu, Chunmei.(2013).Evolution of plant Ash1 SET genes: structural divergence and functional differentiation.GENES & GENOMICS,35(4),463-473. |
| MLA | Zhu, Xinyu,et al."Evolution of plant Ash1 SET genes: structural divergence and functional differentiation".GENES & GENOMICS 35.4(2013):463-473. |
入库方式： OAI收割
来源：植物研究所
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