Comprehensive analysis of NAC domain transcription factor gene family in Vitis vinifera
文献类型：期刊论文
| 作者 | Wang, Nian2; Zheng, Yu2,3; Xin, Haiping; Fang, Linchuan3; Li, Shaohua
|
| 刊名 | PLANT CELL REPORTS
 |
| 出版日期 | 2013 |
| 卷号 | 32期号:1页码:61-75 |
| 关键词 | Grapevine Vitis vinifera NAC domain Gene family |
| ISSN号 | 0721-7714 |
| DOI | 10.1007/s00299-012-1340-y |
| 文献子类 | Article |
| 英文摘要 | Genome-wide identification of grapevine NAC domain genes and investigation of their chromosome locations, gene structures, duplication, evolution, phylogeny and expression profiles. Grapevine is a widely used fruit crop. NAC (NAM, ATAF1/2 and CUC2) domain genes are plant-specific transcription factors (TFs) that comprise a conserved NAM domain in the N-terminus. Members of this gene family have been reported to contribute to plant development. During this study, 74 NAC genes were identified from 12x assembled grapevine genomic sequences. The duplication patterns, genomic structures and phylogeny of these 74 grapevine NAC genes were investigated. To understand the roles of VvNAC during grapevine development, their expression profiles in different tissues including leaf, tendril, inflorescence, stem, root and veraison berry skin were tested using quantitative real-time PCR. Analysis revealed expression diversity of various VvNAC genes among different grapevine tissues. To identify candidate grapevine NAC genes with a role in response to stress, publicly available microarray data were obtained to calculate their expression change under abiotic and biotic treatments, with a number of VvNAC genes displaying up-regulation after stress induction. Therefore, this study has uncovered more knowledge relating to the gene structures, chromosome organizations, evolution, expression profiles and functions of VvNAC genes. |
| 学科主题 | Plant Sciences |
| 出版地 | NEW YORK |
| 电子版国际标准刊号 | 1432-203X |
| WOS关键词 | MOLECULAR CHARACTERIZATION ; FUNCTIONAL-ANALYSIS ; ARABIDOPSIS ; MEMBER ; EXPRESSION ; OSNAC6 ; DEATH |
| WOS研究方向 | Science Citation Index Expanded (SCI-EXPANDED) |
| 语种 | 英语 |
| WOS记录号 | WOS:000313009000006 |
| 出版者 | SPRINGER |
| 资助机构 | National Natural Science Foundation of China (NSFC)(National Natural Science Foundation of China (NSFC)) |
| 源URL | [http://ir.ibcas.ac.cn/handle/2S10CLM1/27955]  |
| 专题 | 中科院北方资源植物重点实验室 |
| 作者单位 | 1.Chinese Acad Sci, Grad Sch, Beijing 100049, Peoples R China 2.Chinese Acad Sci, Key Lab Plant Germplasm Enhancement & Special Agr, Wuhan Bot Garden, Wuhan 430074, Peoples R China 3.Chinese Acad Sci, Beijing Key Lab Grape Sci & Enol, Lab Plant Resources, Inst Bot, Beijing 100093, Peoples R China |
| 推荐引用方式 GB/T 7714 | Wang, Nian,Zheng, Yu,Xin, Haiping,et al. Comprehensive analysis of NAC domain transcription factor gene family in Vitis vinifera[J]. PLANT CELL REPORTS,2013,32(1):61-75. |
| APA | Wang, Nian,Zheng, Yu,Xin, Haiping,Fang, Linchuan,&Li, Shaohua.(2013).Comprehensive analysis of NAC domain transcription factor gene family in Vitis vinifera.PLANT CELL REPORTS,32(1),61-75. |
| MLA | Wang, Nian,et al."Comprehensive analysis of NAC domain transcription factor gene family in Vitis vinifera".PLANT CELL REPORTS 32.1(2013):61-75. |
入库方式： OAI收割
来源：植物研究所
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