Early Transcriptomic Adaptation to Na2CO3 Stress Altered the Expression of a Quarter of the Total Genes in the Maize Genome and Exhibited Shared and Distinctive Profiles with NaCl and High pH Stresses
文献类型：期刊论文
| 作者 | Zhang, Li-Min; Liu, Xiang-Guo; Qu, Xin-Ning; Yu, Ying; Han, Si-Ping; Dou, Yao; Xu, Yao-Yao; Jing, Hai-Chun ; Hao, Dong-Yun
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| 刊名 | JOURNAL OF INTEGRATIVE PLANT BIOLOGY
 |
| 出版日期 | 2013 |
| 卷号 | 55期号:11页码:1147-1165 |
| 关键词 | Maize (Zea mays L.) roots Na2CO3 stress RNA-Seq saline and alkaline stress transcriptomic adaptation |
| ISSN号 | 1672-9072 |
| DOI | 10.1111/jipb.12100 |
| 文献子类 | Article |
| 英文摘要 | Sodium carbonate (Na2CO3) presents a huge challenge to plants by the combined damaging effects of Na+, high pH, and CO32-. Little is known about the cellular responses to Na2CO3 stress. In this study, the transcriptome of maize (Zea mays L. cv. B73) roots exposed to Na2CO3 stress for 5h was compared with those of NaCl and NaOH stresses. The expression of 8,319 genes, representing over a quarter of the total number of genes in the maize genome, was altered by Na2CO3 stress, and the downregulated genes (5,232) outnumbered the upregulated genes (3,087). The effects of Na2CO3 differed from those of NaCl and NaOH, primarily by downregulating different categories of genes. Pathways commonly altered by Na2CO3, NaCl, and NaOH were enriched in phenylpropanoid biosynthesis, oxidation of unsaturated fatty acids, ATP-binding cassette (ABC) transporters, as well as the metabolism of secondary metabolites. Genes for brassinosteroid biosynthesis were specifically upregulated by Na2CO3, while genes involved in ascorbate and aldarate metabolism, protein processing in the endoplasmic reticulum and by N-glycosylation, fatty acid biosynthesis, and the circadian rhythm were downregulated. This work provides the first holistic picture of early transcriptomic adaptation to Na2CO3 stress, and highlights potential molecular pathways that could be manipulated to improve tolerance in maize. |
| 学科主题 | Biochemistry & Molecular Biology ; Plant Sciences |
| 出版地 | HOBOKEN |
| 电子版国际标准刊号 | 1744-7909 |
| WOS关键词 | FALSE DISCOVERY RATE ; SALT STRESS ; SIGNAL-TRANSDUCTION ; TOLERANCE ; TENUIFLORA ; RESPONSES ; SALINITY ; ROOTS ; TOOL ; SEEDLINGS |
| WOS研究方向 | Science Citation Index Expanded (SCI-EXPANDED) |
| 语种 | 英语 |
| WOS记录号 | WOS:000328148600013 |
| 出版者 | WILEY |
| 资助机构 | National Natural Science Foundation of China(National Natural Science Foundation of China (NSFC)) ; National Special Program-New Varieties Breeding of GM maize ; National Science & Technology Support Program |
| 源URL | [http://ir.ibcas.ac.cn/handle/2S10CLM1/28175]  |
| 专题 | 中科院北方资源植物重点实验室 |
| 作者单位 | 1.Jilin Univ, Key Lab Mol Enzymol & Engn, Minist Educ, Changchun 130012, Peoples R China 2.Chinese Acad Sci, Key Lab Plant Resources, Inst Bot, Beijing 100093, Peoples R China 3.[Zhang, Li-Min 4.Qu, Xin-Ning 5.Jilin Acad Agr Sci, Inst Agr Biotechnol, Changchun 130124, Peoples R China 6.Han, Si-Ping 7.Liu, Xiang-Guo 8.Yu, Ying 9.Dou, Yao 10.Xu, Yao-Yao |
| 推荐引用方式 GB/T 7714 | Zhang, Li-Min,Liu, Xiang-Guo,Qu, Xin-Ning,et al. Early Transcriptomic Adaptation to Na2CO3 Stress Altered the Expression of a Quarter of the Total Genes in the Maize Genome and Exhibited Shared and Distinctive Profiles with NaCl and High pH Stresses[J]. JOURNAL OF INTEGRATIVE PLANT BIOLOGY,2013,55(11):1147-1165. |
| APA | Zhang, Li-Min.,Liu, Xiang-Guo.,Qu, Xin-Ning.,Yu, Ying.,Han, Si-Ping.,...&Hao, Dong-Yun.(2013).Early Transcriptomic Adaptation to Na2CO3 Stress Altered the Expression of a Quarter of the Total Genes in the Maize Genome and Exhibited Shared and Distinctive Profiles with NaCl and High pH Stresses.JOURNAL OF INTEGRATIVE PLANT BIOLOGY,55(11),1147-1165. |
| MLA | Zhang, Li-Min,et al."Early Transcriptomic Adaptation to Na2CO3 Stress Altered the Expression of a Quarter of the Total Genes in the Maize Genome and Exhibited Shared and Distinctive Profiles with NaCl and High pH Stresses".JOURNAL OF INTEGRATIVE PLANT BIOLOGY 55.11(2013):1147-1165. |
入库方式： OAI收割
来源：植物研究所
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