中国科学院机构知识库网格
Chinese Academy of Sciences Institutional Repositories Grid
Complete genome sequence of piezotolerant Stutzerimonas kunmingensis 7850S isolated from the sediment of the Mariana Trench

文献类型:期刊论文

作者Jia-Wei Wang1,2; Kun Shang2; Sheng-Yi Wu3; Bo-Yu Zhu2; Mei-Gui Han2; Yuan Zhao2,4; Yi-Qiu Chen1,2; Jia Xie1; Bo Huang1; Zhuang Han2
刊名Marine Genomics
出版日期2022-10
卷号66页码:100996
关键词Stutzerimonas kunmingensis 7850S High hydrostatic pressure Genome Environment adaption
ISSN号1874-7787
DOI10.1016/j.margen.2022.100996
通讯作者Zhuang Han
目次
英文摘要

Stutzerimonas kunmingensis 7850S is a piezotolerant bacterium isolated from the sediment of the Mariana trench. Here, we described the complete genome of strain 7850S, which contains a single circular chromosome of 4,775,870 base pairs with 62.66% G + C content, and harbors 4494 protein-coding genes, 65 transfer RNA genes, and 12 ribosomal RNA genes. The experimental results showed that strain 7850S could grow under hydrostatic pressure of 0.1–70 MPa. Genomic analyses led to identifications of numbers of high hydrostatic pressure-associated genes, such as the ones associated with unsaturated fatty acids, betaine, and ectoine. A complete set of denitrification genes and some heavy metal detoxification genes were also found in this strain. The presence of these genes suggests metabolic characteristics for adaption to hadal environments and provides insights to further understand adaption strategies and ecological roles of Stutzerimonas in hadal environments.

WOS关键词BACTERIUM
资助项目Major Scientific and Techno-logical Projects of Hainan Province ; Na-tional Key Research & Development Program of China ; [ZDKJ2019011] ; [2018YFC0309800]
WOS研究方向Genetics & Heredity ; Marine & Freshwater Biology
语种英语
WOS记录号WOS:000891471600001
出版者ELSEVIER
资助机构Major Scientific and Techno-logical Projects of Hainan Province ; Na-tional Key Research & Development Program of China
源URL[http://ir.idsse.ac.cn/handle/183446/9823]  
专题深海科学研究部_深海生物学研究室_深海微生物活性物质研究组
研究生部
通讯作者Zhuang Han
作者单位1.Hainan University, Haikou, Hainan, 570228, China
2.Institute of Deep-sea Science and Engineering, Chinese Academy of Science, Sanya, Hainan, 572000, China.
3.BGI-Sanya, BGI-Shenzhen, Sanya, Hainan, 572025, China.
4.Hainan Topical Ocean University, Sanya, Hainan, 572000, China.
推荐引用方式
GB/T 7714
Jia-Wei Wang,Kun Shang,Sheng-Yi Wu,et al. Complete genome sequence of piezotolerant Stutzerimonas kunmingensis 7850S isolated from the sediment of the Mariana Trench[J]. Marine Genomics,2022,66:100996.
APA Jia-Wei Wang.,Kun Shang.,Sheng-Yi Wu.,Bo-Yu Zhu.,Mei-Gui Han.,...&Zhuang Han.(2022).Complete genome sequence of piezotolerant Stutzerimonas kunmingensis 7850S isolated from the sediment of the Mariana Trench.Marine Genomics,66,100996.
MLA Jia-Wei Wang,et al."Complete genome sequence of piezotolerant Stutzerimonas kunmingensis 7850S isolated from the sediment of the Mariana Trench".Marine Genomics 66(2022):100996.

入库方式: OAI收割

来源:深海科学与工程研究所

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