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Seasonal and spatial variations of Synechococcus in abundance, pigment types, and genetic diversity in a temperate semi-enclosed bay

文献类型：期刊论文

作者Li, Suheng1,2,3,4; Dong, Yi2,3,4; Sun, Xiaoxia2,3,4,5; Zhao, Yuan2,3,4; Zhao, Li2,3,4; Zhang, Wuchang2,3,4; Xiao, Tian2,3,4
刊名FRONTIERS IN MICROBIOLOGY
出版日期2024-01-11
卷号14页码:14
关键词Synechococcus pigment types cpcBA operon genetic diversity rpoC1 gene co-dominate temperate semi-enclosed bay
DOI10.3389/fmicb.2023.1322548
通讯作者Zhao, Li(zhaoli@qdio.ac.cn) ; Zhang, Wuchang(wuchangzhang@qdio.ac.cn)
英文摘要Synechococcus is abundant and globally widespread in various marine environments. Seasonal and spatial variations in Synechococcus abundance, pigment types, and genetic diversity were investigated based on flow cytometric analysis and high-throughput sequencing of cpcBA operon (encoding phycocyanin) and rpoC1 gene (encoding RNA polymerase) in a temperate semi-enclosed bay. Synechococcus abundance exhibited seasonal variations with the highest value in summer and the lowest value in winter, which was consistent with temperature variation. Three pigment types of Synechococcus type 1, type 2, and type 3 were distinguished based on cpcBA operon, which displayed obvious variations spatially between the inner and the outer bay. Freshwater discharge and water turbidity played important roles in regulating Synechococcus pigment types. Synechococcus assemblages were phylogenetically diverse (12 different lineages) based on rpoC1 gene and dominated by three core lineages S5.1-I, S5.1-IX, and S5.2-CB5 in different seasons. Our study demonstrated that Synechococcus abundance, pigment types, and genetic diversity displayed variations seasonally and spatially by different techniques, which were mainly driven by temperature, salinity, nutrients, and turbidity. The combination of more technical means provides more information for studying Synechococcus distribution. In this study, three pigment types of Synechococcus were discriminated simultaneously by dual lasers flow cytometer for the first time.
WOS关键词EAST CHINA SEA ; MARINE SYNECHOCOCCUS ; PHYLOGENETIC DIVERSITY ; COMMUNITY STRUCTURE ; COASTAL WATERS ; CHESAPEAKE BAY ; PACIFIC-OCEAN ; PICOCYANOBACTERIA ; PROCHLOROCOCCUS ; RED
资助项目National Natural Science Foundation of China (NSFC)[U22A20583] ; National Natural Science Foundation of China (NSFC)[42076139] ; Key Deployment Project of Center for Ocean Mega-Science, Chinese Academy of Sciences[COMS2020Q09] ; Sino-French International Research Project (CNR-CAS) Dynamics and Function of Marine Microorganisms
WOS研究方向Microbiology
语种英语
WOS记录号WOS:001150440300001
出版者FRONTIERS MEDIA SA
源URL[http://ir.qdio.ac.cn/handle/337002/184341]  
专题海洋研究所_海洋生态与环境科学重点实验室
海洋研究所_胶州湾海洋生态系统国家野外研究站
通讯作者Zhao, Li; Zhang, Wuchang
作者单位1.Univ Chinese Acad Sci, Beijing, Peoples R China
2.Chinese Acad Sci, Ctr Ocean Mega Sci, Qingdao, Peoples R China
3.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China
4.Chinese Acad Sci, Inst Oceanol, CAS Key Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China
5.Chinese Acad Sci, Jiaozhou Bay Marine Ecosyst Res Stn, Inst Oceanol, Qingdao, Peoples R China
推荐引用方式
GB/T 7714		 Li, Suheng,Dong, Yi,Sun, Xiaoxia,et al. Seasonal and spatial variations of Synechococcus in abundance, pigment types, and genetic diversity in a temperate semi-enclosed bay[J]. FRONTIERS IN MICROBIOLOGY,2024,14:14.
APA Li, Suheng.,Dong, Yi.,Sun, Xiaoxia.,Zhao, Yuan.,Zhao, Li.,...&Xiao, Tian.(2024).Seasonal and spatial variations of Synechococcus in abundance, pigment types, and genetic diversity in a temperate semi-enclosed bay.FRONTIERS IN MICROBIOLOGY,14,14.
MLA Li, Suheng,et al."Seasonal and spatial variations of Synechococcus in abundance, pigment types, and genetic diversity in a temperate semi-enclosed bay".FRONTIERS IN MICROBIOLOGY 14(2024):14.

入库方式： OAI收割

来源：海洋研究所

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