Genome-Wide Identification and Functional Analysis of the Calcineurin B-like Protein and Calcineurin B-like Protein-Interacting Protein Kinase Gene Families in Chinese Cabbage (Brassica rapa ssp. pekinensis)
文献类型：期刊论文
| 作者 | Wang, Qianwen; Zhao, Kai; Gong, Yuqiang; Yang, Yunqiang ; Yue, Yanling
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| 刊名 | GENES
 |
| 出版日期 | 2022 |
| 卷号 | 13期号:5页码:795 |
| 关键词 | abiotic stresses BraCBL-BraCIPK Chinese cabbage expression profiles functional differentiation preferential interactions CALCIUM SENSOR PHYLOGENETIC ANALYSIS ION HOMEOSTASIS PLANT-GROWTH ORYZA-SATIVA ARABIDOPSIS EVOLUTION RESPONSES CHANNEL DOMAIN |
| DOI | 10.3390/genes13050795 |
| 英文摘要 | In plants, calcineurin B-like proteins (CBL) are a unique set of calcium sensors that decode calcium signals by activating a plant-specific protein kinase family called CBL-interacting protein kinases (CIPKs). The CBL-CIPK family and its interacting complexes regulate plant responses to various environmental stimuli. Chinese cabbage (Brassica rapa ssp. pekinensis) is an important vegetable crop in Asia; however, there are no reports on the role of the CBLs-CIPKs' signaling system in response to abiotic stress during cabbage growth. In this study, 18 CBL genes and 47 CIPK genes were identified from the Chinese cabbage genome. Expansion of the gene families was mainly due to tandem repeats and segmental duplication. An analysis of gene expression patterns showed that different duplicate genes exhibited different expression patterns in response to treatment with Mg2+, K+, and low temperature. In addition, differences in the structural domain sequences of NAF/FISL and interaction profiles in yeast two-hybrid assays suggested a functional divergence of the duplicate genes during the long-term evolution of Chinese cabbage, a result further validated by potassium deficiency treatment using trans-BraCIPK23.1/23.2/23.3 Arabidopsis thaliana. Our results provide a basis for studies related to the functional divergence of duplicate genes and in-depth studies of BraCBL-BraCIPK functions in Chinese cabbage. |
| WOS记录号 | WOS:000802386200001 |
| 源URL | [http://ir.kib.ac.cn/handle/151853/74670]  |
| 专题 | 中国科学院昆明植物研究所 |
| 推荐引用方式 GB/T 7714 | Wang, Qianwen,Zhao, Kai,Gong, Yuqiang,et al. Genome-Wide Identification and Functional Analysis of the Calcineurin B-like Protein and Calcineurin B-like Protein-Interacting Protein Kinase Gene Families in Chinese Cabbage (Brassica rapa ssp. pekinensis)[J]. GENES,2022,13(5):795. |
| APA | Wang, Qianwen,Zhao, Kai,Gong, Yuqiang,Yang, Yunqiang,&Yue, Yanling.(2022).Genome-Wide Identification and Functional Analysis of the Calcineurin B-like Protein and Calcineurin B-like Protein-Interacting Protein Kinase Gene Families in Chinese Cabbage (Brassica rapa ssp. pekinensis).GENES,13(5),795. |
| MLA | Wang, Qianwen,et al."Genome-Wide Identification and Functional Analysis of the Calcineurin B-like Protein and Calcineurin B-like Protein-Interacting Protein Kinase Gene Families in Chinese Cabbage (Brassica rapa ssp. pekinensis)".GENES 13.5(2022):795. |
入库方式： OAI收割
来源：昆明植物研究所
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