Phylogenomics of weevils revisited: data curation and modelling compositional heterogeneity
文献类型：期刊论文
| 作者 | Li, Yan-Da2,3; Engel, Michael S.1; Tihelka, Erik2; Cai, Chenyang2,3
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| 刊名 | BIOLOGY LETTERS
 |
| 出版日期 | 2023-09-20 |
| 卷号 | 19期号:9页码:8 |
| 关键词 | Curculionoidea Belidae phylogeny compositional heterogeneity |
| ISSN号 | 1744-9561 |
| DOI | 10.1098/rsbl.2023.0307 |
| 通讯作者 | Cai, Chenyang(cycai@nigpas.ac.cn) |
| 英文摘要 | Weevils represent one of the most prolific radiations of beetles and the most diverse group of herbivores on land. The phylogeny of weevils (Curculionoidea) has received extensive attention, and a largely satisfactory framework for their interfamilial relationships has been established. However, a recent phylogenomic study of Curculionoidea based on anchored hybrid enrichment (AHE) data yielded an abnormal placement for the family Belidae (strongly supported as sister to Nemonychidae + Anthribidae). Here we reanalyse the genome-scale AHE data for Curculionoidea using various models of molecular evolution and data filtering methods to mitigate anticipated systematic errors and reduce compositional heterogeneity. When analysed with the infinite mixture model CAT-GTR or using appropriately filtered datasets, Belidae are always recovered as sister to the clade (Attelabidae, (Caridae, (Brentidae, Curculionidae))), which is congruent with studies based on morphology and other sources of molecular data. Although the relationships of the 'higher Curculionidae' remain challenging to resolve, we provide a consistent and robust backbone phylogeny of weevils. Our extensive analyses emphasize the significance of data curation and modelling across-site compositional heterogeneity in phylogenomic studies. |
| WOS关键词 | ANCHORED HYBRID ENRICHMENT ; COLEOPTERA CURCULIONOIDEA ; MAXIMUM-LIKELIHOOD ; EVOLUTION ; TREE ; PHYLOGENETICS ; SYSTEMATICS ; ALIGNMENTS ; SELECTION ; INSIGHTS |
| 资助项目 | Strategic Priority Research Program of the Chinese Academy of Sciences[XDB26000000] ; National Natural Science Foundation of China[42222201] ; National Natural Science Foundation of China[42288201] ; China Scholarship Council[202108320010] |
| WOS研究方向 | Life Sciences & Biomedicine - Other Topics ; Environmental Sciences & Ecology ; Evolutionary Biology |
| 语种 | 英语 |
| WOS记录号 | WOS:001163660400001 |
| 出版者 | ROYAL SOC |
| 资助机构 | Strategic Priority Research Program of the Chinese Academy of Sciences ; National Natural Science Foundation of China ; China Scholarship Council |
| 源URL | [http://ir.nigpas.ac.cn/handle/332004/43382]  |
| 专题 | 中国科学院南京地质古生物研究所 |
| 通讯作者 | Cai, Chenyang |
| 作者单位 | 1.Amer Museum Nat Hist, Div Invertebrate Zool, Cent Pk West & 79th St, New York, NY 10024 USA 2.Univ Bristol, Sch Earth Sci, Bristol Palaeobiol Grp, Life Sci Bldg,Tyndall Ave, Bristol BS8 1TQ, Avon, England 3.Chinese Acad Sci, State Key Lab Palaeobiol & Stratig, Nanjing Inst Geol & Palaeontol, Nanjing 210008, Peoples R China |
| 推荐引用方式 GB/T 7714 | Li, Yan-Da,Engel, Michael S.,Tihelka, Erik,et al. Phylogenomics of weevils revisited: data curation and modelling compositional heterogeneity[J]. BIOLOGY LETTERS,2023,19(9):8. |
| APA | Li, Yan-Da,Engel, Michael S.,Tihelka, Erik,&Cai, Chenyang.(2023).Phylogenomics of weevils revisited: data curation and modelling compositional heterogeneity.BIOLOGY LETTERS,19(9),8. |
| MLA | Li, Yan-Da,et al."Phylogenomics of weevils revisited: data curation and modelling compositional heterogeneity".BIOLOGY LETTERS 19.9(2023):8. |
入库方式： OAI收割
来源：南京地质古生物研究所
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