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Transcriptome analysis of purple and green Apostichopus japonicus reared under different breeding environments

文献类型：期刊论文

作者Liu, Bohong1,2,3; Xing, Lili1,2,3; Liu, Shilin1,2,3; Sun, Lina1,2,3; Su, Fang1,2,3; Cui, Wei1,2,3; Jiang, Chunxi1,2,3
刊名FRONTIERS IN MARINE SCIENCE
出版日期2024-02-12
卷号11页码:11
关键词Apostichopus japonicus transcriptome body color breeding environment differentially expressed genes
DOI10.3389/fmars.2024.1334761
通讯作者Xing, Lili(lilixing@qdio.ac.cn) ; Sun, Lina(sunlina@qdio.ac.cn)
英文摘要Sea cucumber (Apostichopus japonicus) is one of the cultured species with the highest production value to a single species in China's marine agricultural industry with high nutritional and medicinal value. Body color influences numerous biological functions in sea cucumbers, and it has become a key trait in selective breeding. It is found that a cultivation environment with strong light intensity leads to a lighter body color of A. japonicus compared to dark conditions. However, little research has been conducted on the molecular mechanisms regulating body color in different breeding environments. In this study, we used Illumina sequencing to examine gene expression patterns in green and purple A. japonicus exposed to different culture conditions. Overall, the genes in the body wall of purple individuals were more affected by the environment. We also identified pathways that were potentially influenced by the breeding environment, such as "Drug metabolism - cytochrome P450", "Porphyrin and chlorophyll metabolism", "Phosphatidylinositol signaling system", "TGF-beta signaling", and "mTOR signaling". The aim of this study was to determine the light conditions and breeding environment that are more favorable to the requirements of body color in A. japonicus and apply them to the selection of high-quality breeds. The results obtained will support the breeding of A. japonicus with specific traits and the production of seedlings to promote the development of this maricultural industry.
WOS关键词MIGRATION INHIBITORY FACTOR ; TGF-BETA ; UDP-GLUCURONOSYLTRANSFERASE ; LIGHT COLOR ; EXPRESSION ; PATHWAY ; SHRIMP ; GROWTH ; GENE
资助项目Institute of Oceanology, Chinese Academy of Sciences10.13039/501100010554
WOS研究方向Environmental Sciences & Ecology ; Marine & Freshwater Biology
语种英语
WOS记录号WOS:001175121700001
出版者FRONTIERS MEDIA SA
源URL[http://ir.qdio.ac.cn/handle/337002/184899]  
专题海洋研究所_海洋生态与环境科学重点实验室
通讯作者Xing, Lili; Sun, Lina
作者单位1.Univ Chinese Acad Sci, Beijing, Peoples R China
2.Chinese Acad Sci, Inst Oceanol, Engn Lab Marine Ranching, Qingdao, Peoples R China
3.Chinese Acad Sci, Inst Oceanol, Key Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China
推荐引用方式
GB/T 7714		 Liu, Bohong,Xing, Lili,Liu, Shilin,et al. Transcriptome analysis of purple and green Apostichopus japonicus reared under different breeding environments[J]. FRONTIERS IN MARINE SCIENCE,2024,11:11.
APA Liu, Bohong.,Xing, Lili.,Liu, Shilin.,Sun, Lina.,Su, Fang.,...&Jiang, Chunxi.(2024).Transcriptome analysis of purple and green Apostichopus japonicus reared under different breeding environments.FRONTIERS IN MARINE SCIENCE,11,11.
MLA Liu, Bohong,et al."Transcriptome analysis of purple and green Apostichopus japonicus reared under different breeding environments".FRONTIERS IN MARINE SCIENCE 11(2024):11.

入库方式： OAI收割

来源：海洋研究所

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