The complete genome of hydrocarbon-degrading Pseudoalteromonas sp. NJ289 and its phylogenetic relationship
文献类型：CNKI期刊论文
| 作者 | LIU Fangming ; WANG Yibin; QU Changfeng; ZHENG Zhou; MIAO Jinlai; XU Hua; XIAO Tian
|
| 发表日期 | 2017-02-15 |
| 出处 | Acta Oceanologica Sinica
 |
| 关键词 | Pseudoalteromonas low temperature environmental adaptability sequencing phylogenetic tree |
| 英文摘要 | Genus Pseudoalteromonas belongs to Family Pseudoalteromonadaceae in Gammaproteobacteria. A cold-adapted gram-negative bacterium, hydrocarbon-degrading Pseudoalteromonas sp. NJ289, was isolated from sea-ice of the Antarctica region, and sequenced the whole genome through the next generation sequencing platform. The assembly yielded three contigs representing two chromosomes and one plasmid with the sizes of 3.2 Mb, 636 kb and 1.8 kb, respectively. The G+C contents of genome were 40.83% and included 3 589 ORFs. Functional annotation indicated some potential roles in enzymatic activity and environmental adaptability. This study may help for understanding the population diverse, evolutionary ecology and the microbial interaction. |
| 文献子类 | CNKI期刊论文 |
| 资助机构 | The National Natural Science Foundation of China under contract Nos 31200097,41576187,U1406402-5 and31202024 ; the Basic Scientific Fund for National Public Research Institutes of China under contract Nos 2013G33 and 2015G10 |
| 卷 | v.36期:02页:92-97 |
| 语种 | 英文; |
| 分类号 | Q933 |
| ISSN号 | 0253-505X |
| 源URL | [http://ir.qdio.ac.cn/handle/337002/189401]  |
| 专题 | 中国科学院海洋研究所 |
| 作者单位 | 1.InstituteofOceanology,ChineseAcademyofSciences 2.UniversityofChineseAcademyofSciences 3.TheFirstInstituteofOceanography,StateOceanicAdministration 4.KeyLaboratoryofSustainableDevelopmentofMarineFisheriesofMinistryofAgriculture,YellowSeaFisheriesResearchInstitute,ChineseAcademyofFisherySciences |
| 推荐引用方式 GB/T 7714 | LIU Fangming,WANG Yibin,QU Changfeng,et al. The complete genome of hydrocarbon-degrading Pseudoalteromonas sp. NJ289 and its phylogenetic relationship. 2017. |
入库方式： OAI收割
来源：海洋研究所
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