Transcriptome data for an ancient 'living-fossil' mollusc, Entemnotrochus rumphii
文献类型：期刊论文
| 作者 | Wang, Yunan1,2,3; Wang, Haiyan1,2,3; Song, Hao1,2,3 |
| 刊名 | SCIENTIFIC DATA
 |
| 出版日期 | 2024-08-24 |
| 卷号 | 11期号:1页码:12 |
| DOI | 10.1038/s41597-024-03700-7 |
| 通讯作者 | Wang, Haiyan(haiyanwang@qdio.ac.cn) ; Song, Hao(songhao910301@foxmail.com) |
| 英文摘要 | The Pleurotomarioidea, commonly referred to as slit shells, constitute one of the most ancient and enduring lineages within the phylum Mollusca, with its fossil record tracing back to the Upper Cambrian epoch. Its rareness and evolutionary antiquity surpass even that of the nautilus. In this study, we conducted the first transcriptome sequencing and analyses of Entemnotrochus rumphii (Schepman, 1879), a representative species of Pleurotomarioidea. Full-length transcriptome sequencing of E. rumphii was performed using the PacBio Sequel II platform with SMRT technology. A total of 64.38 gigabytes of data and 964,550 polymerase reads were generated, resulting in 28,068,998 subreads after data filtering. After de-duplication, correction, and clustering, we identified 19,273 genes. Additionally, next-generation sequencing was performed on 11 tissues of E. rumphii. This investigation provides a detailed portrayal and analytical scrutiny of its transcriptomic landscape. |
| WOS关键词 | GASTROPOD ; CLASSIFICATION ; NOMENCLATOR ; GENERATION ; PHYLOGENY ; ACCURATE ; RNA |
| 资助项目 | Key RD Program of Shandong Province, China(2023CXGC010411) the earmarked fund for CARS (CARS-49) Young Elite Scientists Sponsorship Program by cst(Grant No. 2021QNRC001) Creative Team Project of the Laboratory for Marine Ecology and Environmental Science,[42376088] ; Key RD Program of Shandong Province, China(2023CXGC010411) the earmarked fund for CARS (CARS-49) Young Elite Scientists Sponsorship Program by cst(Grant No. 2021QNRC001) Creative Team Project of the Laboratory for Marine Ecology and Environmental Science,[42206086] ; Key RD Program of Shandong Province, China(2023CXGC010411) the earmarked fund for CARS (CARS-49) Young Elite Scientists Sponsorship Program by cst(Grant No. 2021QNRC001) Creative Team Project of the Laboratory for Marine Ecology and Environmental Science,[32002374] ; Key RD Program of Shandong Province, China(2023CXGC010411) the earmarked fund for CARS (CARS-49) Young Elite Scientists Sponsorship Program by cst(Grant No. 2021QNRC001) Creative Team Project of the Laboratory for Marine Ecology and Environmental Science,[42076092] ; Key RD Program of Shandong Province, China(2023CXGC010411) the earmarked fund for CARS (CARS-49) Young Elite Scientists Sponsorship Program by cst(Grant No. 2021QNRC001) Creative Team Project of the Laboratory for Marine Ecology and Environmental Science,[41776179] ; National Natural Science Foundation of China[2021AB34014] ; Key Research and Development Plan of Guangxi Province[2022YFD2401301] ; Key Research and Development Plan of Guangxi Province[2022FY100304] ; National Key R&D Program of China[2023CXGC010411] ; National Key R&D Program of China[CARS-49] ; National Key R&D Program of China[CARS-47] ; Key R&D Program of Shandong Province, China ; Creative Team Project of the Laboratory for Marine Ecology and Environmental Science, Qingdao National for Marine Science and Technology[XDB42000000] ; Strategic Priority Research Program of the Chinese Academy of Sciences[2021QNRC001] ; Taishan Scholars Program, Young Elite Scientists Sponsorship Program by CAST ; Youth Innovation Promotion Association by CAS |
| WOS研究方向 | Science & Technology - Other Topics |
| 语种 | 英语 |
| WOS记录号 | WOS:001304520700003 |
| 出版者 | NATURE PORTFOLIO |
| 源URL | [http://ir.qdio.ac.cn/handle/337002/198203]  |
| 专题 | 中国科学院海洋研究所 |
| 通讯作者 | Wang, Haiyan; Song, Hao |
| 作者单位 | 1.Qingdao Marine Sci & Technol Ctr, Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China 2.Chinese Acad Sci, Inst Oceanol, 7 Nanhai Rd, Qingdao 266071, Peoples R China 3.Univ Chinese Acad Sci, Coll Earth & Planetary Sci, Beijing 101400, Peoples R China |
| 推荐引用方式 GB/T 7714 | Wang, Yunan,Wang, Haiyan,Song, Hao. Transcriptome data for an ancient 'living-fossil' mollusc, Entemnotrochus rumphii[J]. SCIENTIFIC DATA,2024,11(1):12. |
| APA | Wang, Yunan,Wang, Haiyan,&Song, Hao.(2024).Transcriptome data for an ancient 'living-fossil' mollusc, Entemnotrochus rumphii.SCIENTIFIC DATA,11(1),12. |
| MLA | Wang, Yunan,et al."Transcriptome data for an ancient 'living-fossil' mollusc, Entemnotrochus rumphii".SCIENTIFIC DATA 11.1(2024):12. |
入库方式： OAI收割
来源：海洋研究所
浏览0
下载0
收藏0
其他版本
除非特别说明，本系统中所有内容都受版权保护，并保留所有权利。