A high-quality Chromosome-level reference genome assembly of white-lipped deer (Przewalskium albirostris)
文献类型：期刊论文
| 作者 | Yang, Yuangang; Li, Bin; Luo, Wei; Xu, Bo; Luo, Peng; Zhang, Tongzuo; You, Zhangqiang |
| 刊名 | SCIENTIFIC DATA
 |
| 出版日期 | 2025 |
| 卷号 | 12期号:1 |
| 英文摘要 | White-lipped deer (Przewalskium albirostris) is the sole species in the genus Przewalskium of the Cervidae family. And it is exclusively found in the Qinghai-Tibet Plateau, where it has evolved as a specialized deer on account of the extreme climates and geographical conditions. However, limited research on the genome of this species exists. Here, PacBio and Hi-C sequencing data were constructed to a high-quality Chromosome-level reference genome for the white-lipped deer. The assembly, totaling 2.99 GB, is composed of 34 chromosomes (32 autosomes and X, Y chromosomes), with a scaffold N50 length of 76.18 Mb. Furthermore, it achieved scores of 98.4% and 63.8 in Universal Single-Copy Ortholog (BUSCO) and quality value (QV), respectively. Subsequently, employing the egapx software for genome structural annotation, we identified a total of 21909 protein coding genes, annotating 21859 of them. The high-quality and completeness of our genome sequence and annotation was affirmed by these results. The assembly will significantly contribute to enhance the understanding of the adaptation mechanisms of the white-lipped deer to the extreme environments. |
| 源URL | [http://210.75.249.4/handle/363003/62460]  |
| 专题 | 西北高原生物研究所_中国科学院西北高原生物研究所 |
| 推荐引用方式 GB/T 7714 | Yang, Yuangang,Li, Bin,Luo, Wei,et al. A high-quality Chromosome-level reference genome assembly of white-lipped deer (Przewalskium albirostris)[J]. SCIENTIFIC DATA,2025,12(1). |
| APA | Yang, Yuangang.,Li, Bin.,Luo, Wei.,Xu, Bo.,Luo, Peng.,...&You, Zhangqiang.(2025).A high-quality Chromosome-level reference genome assembly of white-lipped deer (Przewalskium albirostris).SCIENTIFIC DATA,12(1). |
| MLA | Yang, Yuangang,et al."A high-quality Chromosome-level reference genome assembly of white-lipped deer (Przewalskium albirostris)".SCIENTIFIC DATA 12.1(2025). |
入库方式： OAI收割
来源：西北高原生物研究所
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