Arcobacter iocasae sp. nov., a bacterium isolated from the gill homogenate of the mussel Gigantidas platifrons in a cold seep
文献类型：期刊论文
| 作者 | Zhang, Huan1; Jin, Shi1,3; Wang, Hao1; Li, Fei1; Zhong, Zhaoshan1; Guo, Yang1; Luo, Jia2,3; Ye, Ziyun1,3; Lian, Chao1; Wang, Minxiao1,3 |
| 刊名 | INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
 |
| 出版日期 | 2025 |
| 卷号 | 75期号:6页码:9 |
| 关键词 | Arcobacteraceae Arcobacter iocasae sp. nov. cold seep Gigantidas platifrons polyphasic taxonomy |
| ISSN号 | 1466-5026 |
| DOI | 10.1099/ijsem.0.006818 |
| 通讯作者 | Wang, Minxiao(lcl@scsio.ac.cn) ; Li, Chaolun(wangminxiao@qdio.ac.cn) |
| 英文摘要 | A novel Gram-negative, oxidase-and catalase-positive, rod-shaped bacterium, designated strain KX21116T, was isolated from the mussel Gigantidas platifrons collected from a cold seep field in the South China Sea. Strain KX21116T grew optimally at 28 degrees C, pH 6.0 with 3% (w/v) NaCl, under aerobic and microaerobic conditions. Its genome size was 3.16 Mb, with a G+C content of 28.4 mol%. The 16S rRNA sequences revealed that strain KX21116T was closely related to Arcobacter nitrofigilis DSM 7299T (98.77% gene sequence similarity) and Arcobacter acticola AR-13T (95.58%). Phylogenetic and phylogenomic analysis revealed that strain KX21116T clustered with the type species of the genus Arcobacter, with A. nitrofigilis DSM 7299T as its nearest neighbour. The genomic average nucleotide identity (orthoANI) values between strain KX21116T and A. nitrofigilis DSM 7299T were 92.74%, while the in silico DNA-DNA hybridization (GGDC) values of the two strains were 48.8%. The predominant fatty acids are C16:0, C16:1 co7c/C16:1 colic and C18:1 co7c/C18:1 colic. Based on a comparative analysis of phylogenetic, phylogenomic, phenotypic and chemotaxonomic characteristics, strain KX21116T represents a novel species of the genus Arcobacter, for which the name Arcobacter iocasae sp. nov. is proposed. The type strain is KX21116T (=MCCC 1K08505T=KCTC 92900T=JCM 35939T). |
| WOS关键词 | LIPID-COMPOSITION ; CAMPYLOBACTER ; HELICOBACTER ; ALIGNMENT ; DATABASE ; TOOL |
| 资助项目 | National Key R and D Program of China[YFC2811501] ; Marine S&T Fund of Shandong Province for Pilot National Laboratory for Marine Science and Technology (Qingdao)[2022QNLM030004-3] ; National Natural Science Foundation of China[42030407] |
| WOS研究方向 | Microbiology |
| 语种 | 英语 |
| WOS记录号 | WOS:001530451100013 |
| 出版者 | MICROBIOLOGY SOC |
| 源URL | [http://ir.qdio.ac.cn/handle/337002/202595]  |
| 专题 | 中国科学院海洋研究所 |
| 通讯作者 | Wang, Minxiao; Li, Chaolun |
| 作者单位 | 1.Chinese Acad Sci, Inst Oceanol, Qingdao 266071, Peoples R China 2.Chinese Acad Sci, South China Sea Inst Oceanol, State Key Lab Trop Oceanog, Guangzhou 510301, Peoples R China 3.Univ Chinese Acad Sci, Beijing 100049, Peoples R China |
| 推荐引用方式 GB/T 7714 | Zhang, Huan,Jin, Shi,Wang, Hao,et al. Arcobacter iocasae sp. nov., a bacterium isolated from the gill homogenate of the mussel Gigantidas platifrons in a cold seep[J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY,2025,75(6):9. |
| APA | Zhang, Huan.,Jin, Shi.,Wang, Hao.,Li, Fei.,Zhong, Zhaoshan.,...&Li, Chaolun.(2025).Arcobacter iocasae sp. nov., a bacterium isolated from the gill homogenate of the mussel Gigantidas platifrons in a cold seep.INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY,75(6),9. |
| MLA | Zhang, Huan,et al."Arcobacter iocasae sp. nov., a bacterium isolated from the gill homogenate of the mussel Gigantidas platifrons in a cold seep".INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY 75.6(2025):9. |
入库方式： OAI收割
来源：海洋研究所
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