中国科学院机构知识库网格
Chinese Academy of Sciences Institutional Repositories Grid
首页 机构 成果 学者
  
  1. CAS IR Grid
  2. 海洋研究所
  3. 中国科学院海洋研究所
  4. 实验海洋生物学重点实验室
Vibrio iocasae sp. nov., a bacterium isolated from the gill homogenate of bivalve lucinids Indoaustriella scarlatoi in intertidal mangrove sediments

文献类型：期刊论文

作者Luo, Jia2,4; Zhang, Huan3; Ye, Ziyun2,3; Li, Fei3; Zhong, Zhaoshan3; Wang, Jiacheng2,3; Wang, Minxiao2,3; Li, Chaolun1,2,3,4
刊名ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
出版日期2025-08-01
卷号118期号:8页码:11
关键词16S rRNA gene Genome Polyphasic taxonomy Vibrio
ISSN号0003-6072
DOI10.1007/s10482-025-02110-y
通讯作者Wang, Minxiao(wangminxiao@qdio.ac.cn) ; Li, Chaolun(lcl@scsio.ac.cn)
英文摘要A novel Vibrio strain, HN007T, was isolated from the gill homogenate of the bivalve lucinid Indoaustriella scarlatoi in intertidal mangrove sediments in Huiwen town, Hainan province, PR China. Cells of strain HN007T were Gram-stain-negative, facultatively anaerobic, motile, rod-shaped, and positive for oxidase and catalase activities. Growth occurred at 16-39 degrees C, at pH 6.0-11.0 and with 0-7% (w/v) NaCl. Molecular phylogenetic analysis based on 16S rRNA gene sequences affiliated the strain to the members of the genus Vibrio, with the closest species being Vibrio hannami 168GH5-2-16T (96.9% similarity), Vibrio variabilis R-40492T (96.1%), Vibrio aestivus M22T (95.8%), Vibrio maritimus R-40493T (95.4%), Vibrio mexicanus CAIM 1540T (95.4%), and Vibrio profundi TP187T (95.3%). The genome size of strain HN007T was 5,834,927 bp, with a DNA G + C content of 43.5%. The average nucleotide identity, digital DNA-DNA hybridisation, and average amino acid identity values between strain HN007T and the most related strains, were all below the thresholds typically used to define genomic species. Further genomic analysis clustered strain HN007T with the reference strain V. hannami LMG 30079T within the Albus clade. The major cellular fatty acids of strain HN007T were summed feature 3 (C16:1 omega 6c and/or C16:1 omega 7c, 40.9%) and summed feature 8 (C18:1 omega 7c and/or C18:1 omega 6c, 29.4%). The predominant polar lipid was phosphatidylethanolamine, while ubiquinone-8 was the predominant quinone. Based on genomic, chemotaxonomic, and physiological analysis, strain HN007T represents a novel species within the genus Vibrio, proposed to be named Vibrio iocasae sp. nov. The type strain is HN007T (= MCCC 1K08504T = KCTC 92899T = JCM 35938T).
WOS关键词LIPID-COMPOSITION ; DATABASE ; EVOLUTION ; SEQUENCES ; ALIGNMENT ; GENES ; TREES
资助项目National Key R&D Program of China ; Third Institute of Oceanography, Ministry of Natural Resources of the People's Republic of China
WOS研究方向Microbiology
语种英语
WOS记录号WOS:001516650600001
出版者SPRINGER
源URL[http://ir.qdio.ac.cn/handle/337002/201991]  
专题海洋研究所_实验海洋生物学重点实验室
通讯作者Wang, Minxiao; Li, Chaolun
作者单位1.Chinese Acad Sci, South China Sea Inst Oceanol, State Key Lab Trop Oceanog, Guangzhou 510301, Peoples R China
2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
3.Chinese Acad Sci, Inst Oceanol, Ctr Deep Sea Res, Qingdao 266071, Peoples R China
4.Chinese Acad Sci, South China Sea Inst Oceanol, Lab Trop Marine Bioresources & Ecol, Guangdong Prov Key Lab Appl Marine Biol, Guangzhou 510301, Peoples R China
推荐引用方式
GB/T 7714		 Luo, Jia,Zhang, Huan,Ye, Ziyun,et al. Vibrio iocasae sp. nov., a bacterium isolated from the gill homogenate of bivalve lucinids Indoaustriella scarlatoi in intertidal mangrove sediments[J]. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY,2025,118(8):11.
APA Luo, Jia.,Zhang, Huan.,Ye, Ziyun.,Li, Fei.,Zhong, Zhaoshan.,...&Li, Chaolun.(2025).Vibrio iocasae sp. nov., a bacterium isolated from the gill homogenate of bivalve lucinids Indoaustriella scarlatoi in intertidal mangrove sediments.ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY,118(8),11.
MLA Luo, Jia,et al."Vibrio iocasae sp. nov., a bacterium isolated from the gill homogenate of bivalve lucinids Indoaustriella scarlatoi in intertidal mangrove sediments".ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY 118.8(2025):11.

入库方式： OAI收割

来源：海洋研究所

浏览0
下载0
收藏0
其他版本

除非特别说明，本系统中所有内容都受版权保护，并保留所有权利。