Genetic Characteristics and Phylogenetic Relationships of 18 Anchovy Species Based on Mitochondrial Genomes in the Seas Around China
文献类型：期刊论文
| 作者 | Sun, Wenyu1,2; Wang, Yibang1; Zhang, Hui1,2 |
| 刊名 | ECOLOGY AND EVOLUTION
 |
| 出版日期 | 2025-05-01 |
| 卷号 | 15期号:5页码:15 |
| 关键词 | codon usage Engraulidae mitochondrial genome phylogeny |
| ISSN号 | 2045-7758 |
| DOI | 10.1002/ece3.71496 |
| 通讯作者 | Zhang, Hui(zhanghui@qdio.ac.cn) |
| 英文摘要 | The anchovy family (Engraulidae) holds significant economic and ecological value in seas around China, playing a crucial role in fisheries and marine ecosystems in these regions. This study analyzed the complete mitochondrial genome data of 18 Engraulidae species from seas around China, integrating molecular evidence to systematically investigate mitochondrial genome structure, codon usage patterns, and phylogenetic relationships within the family. The mitochondrial genomes of Engraulidae exhibited a highly conserved structure, characterized by significant A + T richness and variable control region lengths. Codon usage analysis in seven Thryssa species revealed that base composition, particularly GC content at the third codon position (GC3s), along with purifying selection, jointly influenced codon usage patterns. Phylogenetic analyses supported the division of the 18 species into two subfamilies, Engraulinae and Coiliinae, and highlighted variability in the phylogenetic placement of Setipinna depending on the inclusion of third codon positions. Furthermore, the genus Thryssa was supported to be polyphyletic: T. baelama and T. kammalensis formed one clade, while T. dussumieri, T. hamiltonii, T. setirostris, T. vitrirostris, and T. mystax constituted a separate branch. These findings provide novel molecular evidence for species identification and the taxonomic classification of Engraulidae, while offering a foundation for further exploration of their evolutionary relationships and systematic taxonomy. |
| WOS关键词 | COASTAL WATERS ; CLUPEIFORMES ENGRAULIDAE ; MOLECULAR PHYLOGENETICS ; CONTROL REGION ; DNA ; IDENTIFICATION ; SEQUENCES ; FISHES ; MINIATURIZATION ; MITOGENOME |
| 资助项目 | National Key Research and Development Project of China |
| WOS研究方向 | Environmental Sciences & Ecology ; Evolutionary Biology |
| 语种 | 英语 |
| WOS记录号 | WOS:001493682200001 |
| 出版者 | WILEY |
| 源URL | [http://ir.qdio.ac.cn/handle/337002/202082]  |
| 专题 | 海洋研究所_海洋生态与环境科学重点实验室 |
| 通讯作者 | Zhang, Hui |
| 作者单位 | 1.Chinese Acad Sci, Inst Oceanol, Key Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China 2.Univ Chinese Acad Sci, Beijing, Peoples R China |
| 推荐引用方式 GB/T 7714 | Sun, Wenyu,Wang, Yibang,Zhang, Hui. Genetic Characteristics and Phylogenetic Relationships of 18 Anchovy Species Based on Mitochondrial Genomes in the Seas Around China[J]. ECOLOGY AND EVOLUTION,2025,15(5):15. |
| APA | Sun, Wenyu,Wang, Yibang,&Zhang, Hui.(2025).Genetic Characteristics and Phylogenetic Relationships of 18 Anchovy Species Based on Mitochondrial Genomes in the Seas Around China.ECOLOGY AND EVOLUTION,15(5),15. |
| MLA | Sun, Wenyu,et al."Genetic Characteristics and Phylogenetic Relationships of 18 Anchovy Species Based on Mitochondrial Genomes in the Seas Around China".ECOLOGY AND EVOLUTION 15.5(2025):15. |
入库方式： OAI收割
来源：海洋研究所
浏览0
下载0
收藏0
其他版本
除非特别说明，本系统中所有内容都受版权保护，并保留所有权利。