中国科学院机构知识库网格
Chinese Academy of Sciences Institutional Repositories Grid
Comparative Analysis of Sponge-Associated, Seawater, and Sediment Microbial Communities from Site F Cold Seep in the South China Sea

文献类型:期刊论文

作者Wang, Yan3,4; Gong, Lin3,4; Gao, Zhaoming2,4; Dong, Dong3,4; Li, Xinzheng1,3,4
刊名MICROORGANISMS
出版日期2025-11-24
卷号13期号:12页码:20
关键词site F cold seep microbiome metagenome chemolithoautotrophic symbiosis
DOI10.3390/microorganisms13122672
通讯作者Dong, Dong(dongd@qdio.ac.cn) ; Li, Xinzheng(lixzh@qdio.ac.cn)
英文摘要Microbial communities at Site F cold seep, ubiquitous in both the environment and the associated fauna, demonstrate clear habitat-specific partitioning. Metagenomic sequencing and binning demonstrated a striking partitioning of microbial taxa at the cold seep: whereas the sponge-associated microbiome was distinctly enriched with specialized sulfur- and methane-oxidizing bacteria that were rare in the environment, it simultaneously exhibited a significantly reduced archaeal content, lower alpha-diversity, and a simpler overall community structure compared to the sediment and seawater communities. Distinct evolutionary lineages and varying abundances were observed among the microbiomes from seawater, sediment, and sponges. Furthermore, their Metagenome-Assembled Genomes (MAGs) exhibited significant differences in genomic features, including genome size and GC content. The sponge-associated microbiome exhibits lower diversity but maintains a high abundance of key functional genes, particularly those involved in sulfur cycling (e.g., apr, dsr, metZ), indicating enhanced metabolic efficiency in energy conservation and nutrient acquisition. This study reveals that the seawater, sediment, and sponge-associated microbiomes exhibit genome simplification and functional specialization in the cold seep environment, with varying lifestyles driving structural optimization and functional remodeling of the symbiotic microbiomes.
WOS关键词METHANE ; SULFUR
资助项目Shandong Provincial Natural Science Foundation[ZR2023MD100] ; National Natural Science Foundation of China[42176114] ; Independent Deployment Project of the Institute of Oceanology, Chinese Academy of Sciences[IOCASZZZX301] ; Biological Resources Programme, Chinese Academy of Sciences[CAS-TAX-24-30]
WOS研究方向Microbiology
语种英语
WOS记录号WOS:001647066400001
出版者MDPI
源URL[http://ir.qdio.ac.cn/handle/337002/204523]  
专题海洋研究所_海洋生物分类与系统演化实验室
通讯作者Dong, Dong; Li, Xinzheng
作者单位1.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao 266000, Peoples R China
2.Chinese Acad Sci, Inst Deep Sea Sci & Engn, Sanya 572000, Peoples R China
3.Chinese Acad Sci, Inst Oceanol, Dept Marine Organism Taxon & Phylogeny, Qingdao Key Lab Marine Biodivers & Conservat, Qingdao 266071, Peoples R China
4.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
推荐引用方式
GB/T 7714
Wang, Yan,Gong, Lin,Gao, Zhaoming,et al. Comparative Analysis of Sponge-Associated, Seawater, and Sediment Microbial Communities from Site F Cold Seep in the South China Sea[J]. MICROORGANISMS,2025,13(12):20.
APA Wang, Yan,Gong, Lin,Gao, Zhaoming,Dong, Dong,&Li, Xinzheng.(2025).Comparative Analysis of Sponge-Associated, Seawater, and Sediment Microbial Communities from Site F Cold Seep in the South China Sea.MICROORGANISMS,13(12),20.
MLA Wang, Yan,et al."Comparative Analysis of Sponge-Associated, Seawater, and Sediment Microbial Communities from Site F Cold Seep in the South China Sea".MICROORGANISMS 13.12(2025):20.

入库方式: OAI收割

来源:海洋研究所

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