Characterization of chloroplast microsatellite loci from whole chloroplast genome of Camellia taliensis and their utilization for evaluating genetic diversity of Camellia reticulata (Theaceae)
文献类型：期刊论文
| 作者 | Tong, Yan1,2,3; Wu, Chun-Yan2,3; Gao, Li-Zhi2
|
| 刊名 | BIOCHEMICAL SYSTEMATICS AND ECOLOGY
 |
| 出版日期 | 2013-10-01 |
| 卷号 | 50页码:207-211 |
| 关键词 | Camellia reticulata Theaceae Polymorphisms Population genetics cpSSR Chloroplast microsatellite |
| ISSN号 | 0305-1978 |
| 通讯作者 | Gao,LZ (reprint author),Chinese Acad Sci,Kunming Inst Bot,Plant Germplasm & Genom Ctr,Germplasm Bank Wild Species Southwest China,Kunming 650201,Peoples R China.,Lgao@mail.kib.ac.cn |
| 英文摘要 | This study characterized chloroplast microsatellite markers for Camellia reticulata, a famous ornamental and edible economic tree species only distributed in Southwestern China. Thirty-two chloroplast microsatellite markers were originally annotated in the whole chloroplast genome of Camellia taliensis, ten polymorphic microsatellite markers were tested in 96 individuals from four natural populations of C reticulata. Alleles numbered from two to four, and average value of Shannon's Information index, Nei's gene diversity, total genetic diversity, genetic diversity within populations, gene differentiation coefficient and gene flow index were 0.408, 0.225, 0.217, 0.102, 0.530 and 0.443, respectively. Our results showed high genetic differentiation and limited gene flow among the studied populations, which may be explained by recent fragmentation of the remnant populations due to human destruction and disturbance of natural habitats of the species. The identified cpSSR markers will be useful for the future studies on population genetics, conservation biology and phylogeography of C reticulata. (C) 2013 Elsevier Ltd. All rights reserved. |
| WOS标题词 | Science & Technology ; Life Sciences & Biomedicine |
| 学科主题 | Biochemistry & Molecular Biology ; Environmental Sciences & Ecology ; Evolutionary Biology |
| 类目[WOS] | Biochemistry & Molecular Biology ; Ecology ; Evolutionary Biology |
| 研究领域[WOS] | Biochemistry & Molecular Biology ; Environmental Sciences & Ecology ; Evolutionary Biology |
| 关键词[WOS] | TEA PLANT ; SINENSIS ; IDENTIFICATION ; AMPLIFICATION ; MARKERS |
| 收录类别 | SCI |
| 资助信息 | National Science Foundation of China [U0936603];Natural Science Foundation of Yunnan Province [2008CC016];Hundreds Oversea Talents Program of Yunnan Province;Top Talent Program of Yunnan Province [20080A009];Chinese Academy of Sciences (CAS);Kunming Institute of Botany, CAS [672705232515, 51O602511121] |
| 语种 | 英语 |
| WOS记录号 | WOS:000325597600031 |
| 公开日期 | 2014-01-13 |
| 源URL | [http://ir.kib.ac.cn/handle/151853/17443]  |
| 专题 | 昆明植物研究所_中国西南野生生物种质资源库 |
| 作者单位 | 1.Chinese Acad Sci, Kunming Inst Bot, Key Lab Biodivers & Biogeog, Kunming 650201, Peoples R China 2.Chinese Acad Sci, Kunming Inst Bot, Plant Germplasm & Genom Ctr, Germplasm Bank Wild Species Southwest China, Kunming 650201, Peoples R China 3.Univ Chinese Acad Sci, Beijing 100039, Peoples R China |
| 推荐引用方式 GB/T 7714 | Tong, Yan,Wu, Chun-Yan,Gao, Li-Zhi. Characterization of chloroplast microsatellite loci from whole chloroplast genome of Camellia taliensis and their utilization for evaluating genetic diversity of Camellia reticulata (Theaceae)[J]. BIOCHEMICAL SYSTEMATICS AND ECOLOGY,2013,50:207-211. |
| APA | Tong, Yan,Wu, Chun-Yan,&Gao, Li-Zhi.(2013).Characterization of chloroplast microsatellite loci from whole chloroplast genome of Camellia taliensis and their utilization for evaluating genetic diversity of Camellia reticulata (Theaceae).BIOCHEMICAL SYSTEMATICS AND ECOLOGY,50,207-211. |
| MLA | Tong, Yan,et al."Characterization of chloroplast microsatellite loci from whole chloroplast genome of Camellia taliensis and their utilization for evaluating genetic diversity of Camellia reticulata (Theaceae)".BIOCHEMICAL SYSTEMATICS AND ECOLOGY 50(2013):207-211. |
入库方式： OAI收割
来源：昆明植物研究所
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