Identification and bioinformatics analysis of pseudogenes from whole genome sequence of Phaeodactylum tricornutum
文献类型：期刊论文
| 作者 | Ji ChangMian ; Huang AiYou ; Liu WenLing ; Pan GuangHua ; Wang GuangCe |
| 刊名 | CHINESE SCIENCE BULLETIN
 |
| 出版日期 | 2013 |
| 卷号 | 58期号:9页码:1010-1017 |
| 关键词 | Phaeodactylum tricornutum pseudogene pseudogene fragment bioinformatics |
| ISSN号 | 1001-6538 |
| 通讯作者 | Wang, GC |
| 中文摘要 | Pseudogenes share sequence similarities with functional genes, but in general they have lost their protein-coding ability. The identification of pseudogenes is a very important step in genome annotation. Phaeodactylum tricornutum is a marine diatom that is rich in polyunsaturated fatty acids (PUFAs). The genome of P. tricornutum has been completely sequenced. To identify pseudogenes in P. tricornutum, we developed a pipeline to discover and characterize pseudogenes. We identified a total of 1654 'true' processed pseudogenes, 714 duplicated pseudogenes and 4729 pseudogene fragments. The results of the bioinformatics analysis indicated that the genome sequence of P. tricornutum contained many pseudogenes and pseudogene fragments. |
| 学科主题 | Science & Technology - Other Topics |
| 收录类别 | SCI |
| 原文出处 | 10.1007/s11434-012-5174-3 |
| 语种 | 英语 |
| 公开日期 | 2014-07-17 |
| 源URL | [http://ir.qdio.ac.cn/handle/337002/16585]  |
| 专题 | 海洋研究所_实验海洋生物学重点实验室 |
| 推荐引用方式 GB/T 7714 | Ji ChangMian,Huang AiYou,Liu WenLing,et al. Identification and bioinformatics analysis of pseudogenes from whole genome sequence of Phaeodactylum tricornutum[J]. CHINESE SCIENCE BULLETIN,2013,58(9):1010-1017. |
| APA | Ji ChangMian,Huang AiYou,Liu WenLing,Pan GuangHua,&Wang GuangCe.(2013).Identification and bioinformatics analysis of pseudogenes from whole genome sequence of Phaeodactylum tricornutum.CHINESE SCIENCE BULLETIN,58(9),1010-1017. |
| MLA | Ji ChangMian,et al."Identification and bioinformatics analysis of pseudogenes from whole genome sequence of Phaeodactylum tricornutum".CHINESE SCIENCE BULLETIN 58.9(2013):1010-1017. |
入库方式： OAI收割
来源：海洋研究所
浏览0
下载0
收藏0
其他版本
除非特别说明，本系统中所有内容都受版权保护，并保留所有权利。