Determination and analysis of the complete genome sequence of Paralichthys olivaceus rhabdovirus (PORV)
文献类型：期刊论文
| 作者 | Zhu, Ruo-Lin; Zhang, Qi-Ya |
| 刊名 | ARCHIVES OF VIROLOGY
 |
| 出版日期 | 2014-04-01 |
| 卷号 | 159期号:4页码:817-820 |
| 关键词 | HEMORRHAGIC SEPTICEMIA VIRUS OLIVE FLOUNDER VHSV EVOLUTION FISH GENE |
| ISSN号 | 0304-8608 |
| 通讯作者 | Zhang, QY (reprint author), Chinese Acad Sci, Grad Sch, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Wuhan 430072, Peoples R China. |
| 中文摘要 | Paralichthys olivaceus rhabdovirus (PORV), which is associated with high mortality rates in flounder, was isolated in China in 2005. Here, we provide an annotated sequence record of PORV, the genome of which comprises 11,182 nucleotides and contains six genes in the order 3'-N-P-M-G-NV-L-5'. Phylogenetic analysis based on glycoprotein sequences of PORV and other rhabdoviruses showed that PORV clusters with viral haemorrhagic septicemia virus (VHSV), genus Novirhabdovirus, family Rhabdoviridae. Further phylogenetic analysis of the combined amino acid sequences of six proteins of PORV and VHSV strains showed that PORV clusters with Korean strains and is closely related to Asian strains, all of which were isolated from flounder. In a comparison in which the sequences of the six proteins were combined, PORV shared the highest identity (98.3 %) with VHSV strain KJ2008 from Korea. |
| 英文摘要 | Paralichthys olivaceus rhabdovirus (PORV), which is associated with high mortality rates in flounder, was isolated in China in 2005. Here, we provide an annotated sequence record of PORV, the genome of which comprises 11,182 nucleotides and contains six genes in the order 3'-N-P-M-G-NV-L-5'. Phylogenetic analysis based on glycoprotein sequences of PORV and other rhabdoviruses showed that PORV clusters with viral haemorrhagic septicemia virus (VHSV), genus Novirhabdovirus, family Rhabdoviridae. Further phylogenetic analysis of the combined amino acid sequences of six proteins of PORV and VHSV strains showed that PORV clusters with Korean strains and is closely related to Asian strains, all of which were isolated from flounder. In a comparison in which the sequences of the six proteins were combined, PORV shared the highest identity (98.3 %) with VHSV strain KJ2008 from Korea. |
| WOS标题词 | Science & Technology ; Life Sciences & Biomedicine |
| 类目[WOS] | Virology |
| 研究领域[WOS] | Virology |
| 关键词[WOS] | HEMORRHAGIC SEPTICEMIA VIRUS ; OLIVE FLOUNDER ; VHSV ; EVOLUTION ; FISH ; GENE |
| 收录类别 | SCI |
| 资助信息 | National Natural Science Foundation of China [31072239, 31270213]; FEBL [2011FBZ12, 2008FBZ16] |
| 语种 | 英语 |
| WOS记录号 | WOS:000334055200024 |
| 公开日期 | 2014-08-08 |
| 源URL | [http://ir.ihb.ac.cn/handle/342005/20043]  |
| 专题 | 水生生物研究所_鱼类生物学及渔业生物技术研究中心_期刊论文 |
| 作者单位 | Chinese Acad Sci, Grad Sch, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Wuhan 430072, Peoples R China |
| 推荐引用方式 GB/T 7714 | Zhu, Ruo-Lin,Zhang, Qi-Ya. Determination and analysis of the complete genome sequence of Paralichthys olivaceus rhabdovirus (PORV)[J]. ARCHIVES OF VIROLOGY,2014,159(4):817-820. |
| APA | Zhu, Ruo-Lin,&Zhang, Qi-Ya.(2014).Determination and analysis of the complete genome sequence of Paralichthys olivaceus rhabdovirus (PORV).ARCHIVES OF VIROLOGY,159(4),817-820. |
| MLA | Zhu, Ruo-Lin,et al."Determination and analysis of the complete genome sequence of Paralichthys olivaceus rhabdovirus (PORV)".ARCHIVES OF VIROLOGY 159.4(2014):817-820. |
入库方式： OAI收割
来源：水生生物研究所
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