Apical Groove Type and Molecular Phylogeny Suggests Reclassification of Cochlodinium geminatum as Polykrikos geminatum
文献类型：期刊论文
| 作者 | [Qiu, Dajun ; Huang, Liangmin ; Liu, Sheng ; Lin, Senjie] Chinese Acad Sci, CAS Key Lab Trop Marine Bioresources & Ecol, South China Sea Inst Oceanol, Guangzhou, Guangdong, Peoples R China ; [Zhang, Huan ; Lin, Senjie] Univ Connecticut, Dept Marine Sci, Groton, CT 06340 USA |
| 刊名 | PLOS ONE
 |
| 出版日期 | 2013 |
| 卷号 | 8期号:8页码:- |
| ISSN号 | 1932-6203 |
| 通讯作者 | djqiu@scsio.ac.cn ; senjie.lin@uconn.edu |
| 中文摘要 | Traditionally Cocholodinium and Gymnodinium sensu lato clade are distinguished based on the cingulum turn number, which has been increasingly recognized to be inadequate for Gymnodiniales genus classification. This has been improved by the combination of the apical groove characteristics and molecular phylogeny, which has led to the erection of several new genera (Takayama, Akashiwo, Karenia, and Karlodinium). Taking the apical groove characteristics and molecular phylogeny combined approach, we reexamined the historically taxonomically uncertain species Cochlodinium geminatum that formed massive blooms in Pearl River Estuary, China, in recent years. Samples were collected from a bloom in 2011 for morphological, characteristic pigment, and molecular analyses. We found that the cingulum in this species wraps around the cell body about 1.2 turns on average but can appear under the light microscopy to be >1.5 turns after the cells have been preserved. The shape of its apical groove, however, was stably an open-ended anticlockwise loop of kidney bean shape, similar to that of Polykrikos. Furthermore, the molecular phylogenetic analysis using 18S rRNA-ITS-28S rRNA gene cistron we obtained in this study also consistently placed this species closest to Polykrikos within the Gymnodinium sensu stricto clade and set it far separated from the clade of Cochlodinium. These results suggest that this species should be transferred to Polykrikos as Polykrikos geminatum. Our results reiterate the need to use the combination of apical groove morphology and molecular phylogeny for the classification of species within the genus of Cochlodinium and other Gymnodiniales lineages. |
| 学科主题 | Multidisciplinary Sciences |
| 资助信息 | This research is supported by the National Science Foundation of China (41129001, 41130855, 41006067) (http://www.nsfc.gov.cn/). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of manuscript. |
| 原文出处 | PUBLIC LIBRARY SCIENCE |
| 语种 | 英语 |
| WOS记录号 | WOS:000323425700038 |
| 公开日期 | 2015-01-22 |
| 源URL | [http://ir.scsio.ac.cn/handle/344004/10996]  |
| 专题 | 南海海洋研究所_中科院海洋生物资源可持续利用重点实验室 |
| 推荐引用方式 GB/T 7714 | [Qiu, Dajun,Huang, Liangmin,Liu, Sheng,et al. Apical Groove Type and Molecular Phylogeny Suggests Reclassification of Cochlodinium geminatum as Polykrikos geminatum[J]. PLOS ONE,2013,8(8):-. |
| APA | [Qiu, Dajun,Huang, Liangmin,Liu, Sheng,Lin, Senjie] Chinese Acad Sci, CAS Key Lab Trop Marine Bioresources & Ecol, South China Sea Inst Oceanol, Guangzhou, Guangdong, Peoples R China,[Zhang, Huan,&Lin, Senjie] Univ Connecticut, Dept Marine Sci, Groton, CT 06340 USA.(2013).Apical Groove Type and Molecular Phylogeny Suggests Reclassification of Cochlodinium geminatum as Polykrikos geminatum.PLOS ONE,8(8),-. |
| MLA | [Qiu, Dajun,et al."Apical Groove Type and Molecular Phylogeny Suggests Reclassification of Cochlodinium geminatum as Polykrikos geminatum".PLOS ONE 8.8(2013):-. |
入库方式： OAI收割
来源：南海海洋研究所
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