Bacterial diversity and community structure in the East China Sea by 454 sequencing of the 16S rRNA gene
文献类型：期刊论文
| 作者 | Dong Yi1,2; Zhao Yuan1; Zhang Wenyan1; Li Yan3 ; Zhou Feng4; Liu Chenggang5; Wu Ying6; Liu Sumei7; Zhang Wuchang1; Xiao Tian1
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| 刊名 | CHINESE JOURNAL OF OCEANOLOGY AND LIMNOLOGY
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| 出版日期 | 2014-05-01 |
| 卷号 | 32期号:3页码:527-541 |
| 关键词 | bacterial diversity community structure 454 sequencing water masses canonical correspondence analysis East China Sea |
| 通讯作者 | Xiao, T (reprint author), Chinese Acad Sci, Inst Oceanol, Key Lab Marine Ecol & Environm Sci, Qingdao 266071, Peoples R China. |
| 英文摘要 | The 454 sequencing method was used to detect bacterial diversity and community structure in the East China Sea. Overall, 149 067 optimized reads with an average length of 454 nucleotides were obtained from 17 seawater samples and five sediment samples sourced in May 2011. A total of 22 phyla, 34 classes, 74 orders, 146 families, and 333 genera were identified in this study. Some of them were detected for the first time from the East China Sea. The estimated richness and diversity indices were both higher in the sediment samples compared with in the seawater samples. All the samples were divided by their diversity indices into four regions. Similarity analysis showed that the seawater samples could be classified into six groups. The groups differed from each other and had unique community structure characteristics. It was found that different water masses in the sampling areas may have had some influence on the bacterial community structure. A canonical correspondence analysis revealed that seawater samples in different areas and at different depths were affected by different environmental parameters. This study will lay the foundation for future research on microbiology in the East China Sea. |
| 学科主题 | Marine & Freshwater Biology; Oceanography |
| 收录类别 | SCI |
| 语种 | 英语 |
| WOS记录号 | WOS:000335767800006 |
| 源URL | [http://ir.qdio.ac.cn/handle/337002/23992]  |
| 专题 | 海洋研究所_海洋生态与环境科学重点实验室 |
| 作者单位 | 1.Chinese Acad Sci, Inst Oceanol, Key Lab Marine Ecol & Environm Sci, Qingdao 266071, Peoples R China 2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 3.Shandong Acad Sci, Energy Res Inst, Jinan 250014, Peoples R China 4.State Ocean Adm, Inst Oceanog 2, State Key Lab Satellite Ocean Environm Dynam, Hangzhou 310012, Zhejiang, Peoples R China 5.State Ocean Adm, Inst Oceanog 2, Lab Marine Ecosyst & Biogeochem, Hangzhou 310012, Zhejiang, Peoples R China 6.E China Normal Univ, State Key Lab Estuarine & Coastal Res, Shanghai 200062, Peoples R China 7.Ocean Univ China, Minist Educ, Key Lab Marine Chem Theory & Technol, Qingdao 266100, Peoples R China |
| 推荐引用方式 GB/T 7714 | Dong Yi,Zhao Yuan,Zhang Wenyan,et al. Bacterial diversity and community structure in the East China Sea by 454 sequencing of the 16S rRNA gene[J]. CHINESE JOURNAL OF OCEANOLOGY AND LIMNOLOGY,2014,32(3):527-541. |
| APA | Dong Yi.,Zhao Yuan.,Zhang Wenyan.,Li Yan.,Zhou Feng.,...&Xiao Tian.(2014).Bacterial diversity and community structure in the East China Sea by 454 sequencing of the 16S rRNA gene.CHINESE JOURNAL OF OCEANOLOGY AND LIMNOLOGY,32(3),527-541. |
| MLA | Dong Yi,et al."Bacterial diversity and community structure in the East China Sea by 454 sequencing of the 16S rRNA gene".CHINESE JOURNAL OF OCEANOLOGY AND LIMNOLOGY 32.3(2014):527-541. |
入库方式： OAI收割
来源：海洋研究所
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