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Towards a natural classification and backbone tree for Pleosporaceae

文献类型:期刊论文

AuthorAriyawansa, Hiran A.1,2,3,4,5; Thambugala, Kasun M.4,5; Manamgoda, Dimuthu S.4,5; Jayawardena, Ruvishika4,5; Camporesi, Erio4,5,6; Boonmee, Saranyaphat4,5; Wanasinghe, Dhanushka N.4,5; Phookamsak, R.4,5; Hongsanan, Singang4,5; Singtripop, Chonticha4,5
SourceFUNGAL DIVERSITY
Issued Date2015-03-01
Volume71Issue:1Pages:85-139
KeywordBackbone tree Dothideomycetes Pleosporales Plant pathogens Saprobes
Corresponding AuthorHyde,KD (reprint author),Chinese Acad Sci,Key Lab Plant Div & Biogeog East Asia,Kunming Inst Bot,Kunming 650201,Peoples R China. ; kdhyde3@gmail.com
English AbstractThe family Pleosporaceae includes numerous saprobic, opportunistic human, and plant pathogenic taxa. The classification of genera and species Pleosporaceae has been a major challenge due to the lack of a clear understanding of the importance of the morphological characters used to distinguish taxa as well as the lack of reference strains. Recent treatments concluded that Pleospora and some other genera in Pleosporaceae are likely polyphyletic. In order to establish the evolutionary relationships and to resolve the polyphyletic nature of Pleospora and allied genera, we sequenced the 18S nrDNA, 28S nrDNA, ITS, GAPDH, RPB2 and TEF1-alpha gene regions of Pleosporaceae species and phylogenetically analysed this data. Multigene phylogenies strongly support the monophyletic nature of Pleosporaceae among the other families in Pleosporales, and the acceptance of the genera Alternaria, Bipolaris, Clathrospora, Comoclathris, Curvularia, Dactuliophora, Decorospora, Diademosa, Exserohilum, Extrawettsteinina, Gibbago, Neocamarosporium, Paradendryphiella, Platysporoides, Pleospora, Porocercospora, Pseudoyuconia and Pyrenophora. Austropleospora, Dendryphion, Edenia and Macrospora are excluded from the family based on morphology coupled with molecular data. Two novel species, Alternaria murispora in this paper and Comoclathris sedi are introduced. The sexual morph of Alternaria alternata is re-described and illustrated using modern concepts from fresh collections. The paraphyletic nature of Pleospora is resolved based on the available morpho-molecular data, but further sampling with fresh collections, reference or ex-type strains and molecular data are needed to obtain a natural classification of genera and the family.
SubjectMycology
WOS SubjectMycology
WOS Subject ExtendedMycology
WOS Keyword PlusDOTHIDEOMYCETES INCERTAE-SEDIS ; MAXIMUM-LIKELIHOOD ; SPECIES RECOGNITION ; TAXONOMIC STATUS ; SEQUENCE DATA ; GENUS ; GENERA ; FUNGI ; NOV. ; COCHLIOBOLUS
Indexed TypeSCI
Language英语
WOS IDWOS:000352210200003
源URL[http://ir.kib.ac.cn/handle/151853/20631]  
Collection昆明植物研究所_中国科学院东亚植物多样性与生物地理学重点实验室
Affiliation1.Chinese Acad Sci, Key Lab Plant Div & Biogeog East Asia, Kunming Inst Bot, Kunming 650201, Peoples R China
2.World Agroforestry Ctr, East Asia & Cent, Heilongtan 650201, Kunming, Peoples R China
3.Guizhou Univ, Engn & Res Ctr Southwest Biopharmaceut Resources, Natl Educ Minist China, Guiyang 550025, Guizhou, Peoples R China
4.Mae Fah Luang Univ, Sch Sci, Chiang Rai 57100, Thailand
5.Mae Fah Luang Univ, Inst Excellence Fungal Res, Chiang Rai 57100, Thailand
6.AMB Grp Micol Forlivese Antonio Cicognani, Forli, Italy
7.King Saudi Univ, Dept Bot & Microbiol, Riyadh, Saudi Arabia
Recommended Citation
GB/T 7714
Ariyawansa, Hiran A.,Thambugala, Kasun M.,Manamgoda, Dimuthu S.,et al. Towards a natural classification and backbone tree for Pleosporaceae[J]. FUNGAL DIVERSITY,2015,71(1):85-139.
APA Ariyawansa, Hiran A..,Thambugala, Kasun M..,Manamgoda, Dimuthu S..,Jayawardena, Ruvishika.,Camporesi, Erio.,...&Hyde, Kevin D..(2015).Towards a natural classification and backbone tree for Pleosporaceae.FUNGAL DIVERSITY,71(1),85-139.
MLA Ariyawansa, Hiran A.,et al."Towards a natural classification and backbone tree for Pleosporaceae".FUNGAL DIVERSITY 71.1(2015):85-139.

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来源:昆明植物研究所

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