Short Linear Motifs recognized by SH2, SH3 and Ser/Thr Kinase domains are conserved in disordered protein regions
文献类型：期刊论文
| 作者 | Ren, S; Uversky, VN; Chen, ZJ; Dunker, AK; Obradovic, Z |
| 刊名 | BMC GENOMICS
 |
| 出版日期 | 2008 |
| 卷号 | 9期号:1页码:S26-S26 |
| 通讯作者 | Obradovic, Z (reprint author), Temple Univ, Ctr Informat Sci & Technol, Philadelphia, PA 19122 USA.,rsysjtu@hotmail.com ; vuversky@iupui.edu ; zjchen@sibs.ac.cn ; kedunker@iupui.edu ; zoran@ist.temple.edu |
| 英文摘要 | Background: Protein interactions are essential for most cellular functions. Interactions mediated by domains that appear in a large number of proteins are of particular interest since they are expected to have an impact on diversities of cellular processes such as signal transduction and immune response. Many well represented domains recognize and bind to primary sequences less than 10 amino acids in length called Short Linear Motifs (SLiMs). Results: In this study, we systematically studied the evolutionary conservation of SLiMs recognized by SH2, SH3 and Ser/Thr Kinase domains in both ordered and disordered protein regions. Disordered protein regions are protein sequences that lack a fixed three-dimensional structure under putatively native conditions. We find that, in all these domains examined, SLiMs are more conserved in disordered regions. This trend is more evident in those protein functional groups that are frequently reported to interact with specific domains. Conclusion: The correlation between SLiM conservation with disorder prediction demonstrates that functional SLiMs recognized by each domain occur more often in disordered as compared to structured regions of proteins. |
| 学科主题 | Biotechnology & Applied Microbiology; Genetics & Heredity |
| 类目[WOS] | Biotechnology & Applied Microbiology ; Genetics & Heredity |
| 收录类别 | SCI |
| 语种 | 英语 |
| WOS记录号 | WOS:000206244200027 |
| 版本 | 出版稿 |
| 源URL | [http://202.127.25.143/handle/331003/1488]  |
| 专题 | 上海生化细胞研究所_上海生科院生化细胞研究所 |
| 推荐引用方式 GB/T 7714 | Ren, S,Uversky, VN,Chen, ZJ,et al. Short Linear Motifs recognized by SH2, SH3 and Ser/Thr Kinase domains are conserved in disordered protein regions[J]. BMC GENOMICS,2008,9(1):S26-S26. |
| APA | Ren, S,Uversky, VN,Chen, ZJ,Dunker, AK,&Obradovic, Z.(2008).Short Linear Motifs recognized by SH2, SH3 and Ser/Thr Kinase domains are conserved in disordered protein regions.BMC GENOMICS,9(1),S26-S26. |
| MLA | Ren, S,et al."Short Linear Motifs recognized by SH2, SH3 and Ser/Thr Kinase domains are conserved in disordered protein regions".BMC GENOMICS 9.1(2008):S26-S26. |
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