中国科学院机构知识库网格
Chinese Academy of Sciences Institutional Repositories Grid
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CAS IR Grid
机构
计算技术研究所 [53]
理论物理研究所 [7]
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期刊论文 [69]
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GPCR-BSD: a database of binding sites of human G-protein coupled receptors under diverse states
期刊论文
OAI收割
BMC BIOINFORMATICS, 2024, 卷号: 25, 期号: 1, 页码: 16
作者:
Liu, Fan
;
Zhou, Han
;
Li, Xiaonong
;
Zhou, Liangliang
;
Yu, Chungong
  |  
收藏
  |  
浏览/下载:2/0
  |  
提交时间:2024/12/06
G-protein coupled receptor
State-specific structure
Binding site
Key residue
Database
Accurate and robust protein sequence design with CarbonDesign
期刊论文
OAI收割
NATURE MACHINE INTELLIGENCE, 2024, 卷号: 6, 期号: 5, 页码: 14
作者:
Ren, Milong
;
Yu, Chungong
;
Bu, Dongbo
;
Zhang, Haicang
  |  
收藏
  |  
浏览/下载:1/0
  |  
提交时间:2024/12/06
Accurate prediction of RNA secondary structure including pseudoknots through solving minimum-cost flow with learned potentials
期刊论文
OAI收割
COMMUNICATIONS BIOLOGY, 2024, 卷号: 7, 期号: 1, 页码: 13
作者:
Gong, Tiansu
;
Ju, Fusong
;
Bu, Dongbo
  |  
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2024/05/20
SASA-Net: A Spatial-Aware Self-Attention Mechanism for Building Protein 3D Structure Directly From Inter- Residue Distances
期刊论文
OAI收割
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2023, 卷号: 20, 期号: 6, 页码: 3482-3488
作者:
Gong, Tiansu
;
Ju, Fusong
;
Sun, Shiwei
;
Bu, Dongbo
  |  
收藏
  |  
浏览/下载:2/0
  |  
提交时间:2024/05/20
Deep learning
protein structure prediction
NeuralGLS: learning to guide local search with graph convolutional network for the traveling salesman problem
期刊论文
OAI收割
NEURAL COMPUTING & APPLICATIONS, 2023, 页码: 20
作者:
Sui, Jingyan
;
Ding, Shizhe
;
Xia, Boyang
;
Liu, Ruizhi
;
Bu, Dongbo
  |  
收藏
  |  
浏览/下载:15/0
  |  
提交时间:2023/12/04
Graph convolutional network
Guided local search
Traveling salesman problem
Protein Structure Prediction: Challenges, Advances, and the Shift of Research Paradigms
期刊论文
OAI收割
GENOMICS PROTEOMICS & BIOINFORMATICS, 2023, 卷号: 21, 期号: 5, 页码: 913-925
作者:
Huang, Bin
;
Kong, Lupeng
;
Wang, Chao
;
Ju, Fusong
;
Zhang, Qi
  |  
收藏
  |  
浏览/下载:13/0
  |  
提交时间:2024/05/20
Protein folding
Protein structure prediction
Deep learning
Transformer
Language model
Dominant neoantigen verification in hepatocellular carcinoma by a single-plasmid system coexpressing patient HLA and antigen
期刊论文
OAI收割
JOURNAL FOR IMMUNOTHERAPY OF CANCER, 2023, 卷号: 11, 期号: 4, 页码: 16
作者:
Chen, Pu
;
Chen, Dongbo
;
Bu, Dechao
;
Gao, Jie
;
Qin, Wanying
  |  
收藏
  |  
浏览/下载:17/0
  |  
提交时间:2023/12/04
Liver Neoplasms
Antigens
Neoplasm
Immunotherapy
Immunoassay
Immunogenicity
Vaccine
Accurate and efficient protein sequence design through learning concise local environment of residues
期刊论文
OAI收割
BIOINFORMATICS, 2023, 卷号: 39, 期号: 3, 页码: btad122
作者:
Huang, Bin
;
Fan, Tingwen
;
Wang, Kaiyue
;
Zhang, Haicang
;
Yu, Chungong
  |  
收藏
  |  
浏览/下载:16/0
  |  
提交时间:2023/12/07
COMPUTATIONAL DESIGN
PROLINE
GIPS-Mix for Accurate Identification of Isomeric Components in Glycan Mixtures Using Intelligent Group-Opting Strategy
期刊论文
OAI收割
ANALYTICAL CHEMISTRY, 2022, 页码: 9
作者:
Huang, Chuncui
;
Hou, Meijie
;
Yan, Jingyu
;
Wang, Hui
;
Wang, Yu
  |  
收藏
  |  
浏览/下载:23/0
  |  
提交时间:2023/07/12
Microbiome Resilience and Health Implications for People in Half-Year Travel
期刊论文
OAI收割
FRONTIERS IN IMMUNOLOGY, 2022, 卷号: 13, 页码: 15
作者:
Cheng, Mingyue
;
Liu, Hong
;
Han, Maozhen
;
Li, Shuai Cheng
;
Bu, Dongbo
  |  
收藏
  |  
浏览/下载:34/0
  |  
提交时间:2022/12/07
travel
enterotype
microbiome
bi-directional plasticity
resilience
dietary shift
immunity
health